RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 TAF6LQ9Y6J9 622 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 SPECC1L-ADORA2AF8WAN1 911 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 KRT37O76014 449 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 MT-ND3P03897 115 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 MAP7D3Q8IWC1 876 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 EFHD1Q9BUP0 239 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 WDR11Q9BZH6 1224 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 LEMD3Q9Y2U8 911 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 PCDHA1Q9Y5I3 950 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 TTI1O43156 1089 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 CPP00450 1065 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 FCER1AP12319 257 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 MECOMQ03112 1051 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 TRIML2Q8N7C3 387 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 BTG4Q9NY30 223 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 LPXNO60711 386 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 ACCSQ96QU6 501 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 FAM167BQ9BTA0 163 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 PABPC3Q9H361 631 aaKnown RBP5.13□□□□□ -1.59
CSMD3-203ENST00000343508 TRIM33Q9UPN9 1127 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 NVLO15381 856 aaKnown RBP5.13□□□□□ -1.59
CSMD3-203ENST00000343508 SOX5P35711 763 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 CATSPER1Q8NEC5 780 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 AENQ8WTP8 325 aaKnown RBP5.13□□□□□ -1.59
CSMD3-203ENST00000343508 MAML1Q92585 1016 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 PLA2G12BQ9BX93 195 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 PNMA2Q9UL42 364 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 SNX24Q9Y343 169 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 O00370 1275 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 TMOD1P28289 359 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 ST3GAL1Q11201 340 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 MFSD14BQ5SR56 506 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 USP17L2Q6R6M4 530 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 TTC13Q8NBP0 860 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 SLC35G2Q8TBE7 412 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 MRPL40Q9NQ50 206 aaKnown RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 BSDC1Q9NW68 430 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 ANKFY1Q9P2R3 1169 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 TACC3Q9Y6A5 838 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 GIPC1O14908 333 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 TOM1O60784 492 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 HIC1Q14526 733 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 ZNF526Q8TF50 670 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 RAPGEF5Q92565 580 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 PPWD1Q96BP3 646 aaKnown RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 ZNF577Q9BSK1 485 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 FOXP3Q9BZS1 431 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 A0A0G2JND7 137 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 PDXKO00764 312 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 DLATP10515 647 aaKnown RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 HERVK_113P62684 666 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 KRT81Q14533 505 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 MMEL1Q495T6 779 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 DCLRE1BQ9H816 532 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 RXFP1Q9HBX9 757 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 PABPN1LA6NDY0 278 aaKnown RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 UCHL3P15374 230 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 ARL1P40616 181 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 PAPOLAP51003 745 aaKnown RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 CRELD2Q6UXH1 353 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 CNBD1Q8NA66 436 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 ZC3H15Q8WU90 426 aaKnown RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 IFT122Q9HBG6 1241 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 DDX20Q9UHI6 824 aaKnown RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 SLC1A1P43005 524 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 ANTXR2P58335 489 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 FAM102BQ5T8I3 360 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 NXNQ6DKJ4 435 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 ZKSCAN4Q969J2 545 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 FAM20AQ96MK3 541 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 IL1RAPL1Q9NZN1 696 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 ANAPC7Q9UJX3 599 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 DNAJC12Q9UKB3 198 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 FAM47DPA6NHR8 397 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 E7ENQ6 273 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 BACH1O14867 736 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 FGFR4P22455 802 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 CERKLQ49MI3 558 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 DPP8Q6V1X1 898 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 CYFIP1Q7L576 1253 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 COL23A1Q86Y22 540 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 ALKBH8Q96BT7 664 aaKnown RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 PAPOLBQ9NRJ5 636 aaKnown RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 PCDHA6Q9UN73 950 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 APOBEC2Q9Y235 224 aaKnown RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 PCDHA8Q9Y5H6 950 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 MYBL1P10243 752 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 CNGA1P29973 690 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 VHLP40337 213 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 FSCBQ5H9T9 825 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 UFL1O94874 794 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 POLR2MP0CAP2 368 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 YWHAGP61981 247 aaKnown RBP eCLIP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 RASA3Q14644 834 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 LRRC14Q15048 493 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 MRPL11Q9Y3B7 192 aaKnown RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 NQO1P15559 274 aaKnown RBP5.12□□□□□ -1.59
CSMD3-203ENST00000343508 SCP2P22307 547 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 PIGSQ96S52 555 aa5.12□□□□□ -1.59
CSMD3-203ENST00000343508 CYTH2Q99418 400 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms