RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 IPO5O00410 1097 aaKnown RBP12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 ANXA13P27216 316 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 PRCPP42785 496 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 THNSL1Q8IYQ7 743 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 DTX3LQ8TDB6 740 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 PRMT1Q99873 361 aaKnown RBP12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 ADAM22Q9P0K1 906 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 STAP2Q9UGK3 403 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 PNMA2Q9UL42 364 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 ARHGAP26Q9UNA1 814 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 ARHGEF9O43307 516 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 GCLMP48507 274 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 GUCY1A3Q02108 690 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 ERFEQ4G0M1 354 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 RESP18Q5W5W9 173 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 RINLQ6ZS11 566 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 NAF1Q96HR8 494 aaKnown RBP12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 DDX47Q9H0S4 455 aaKnown RBP12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 NEUROG2Q9H2A3 272 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 CPVLQ9H3G5 476 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 ERBB4Q15303 1308 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 DEUP1Q05D60 604 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 AP1B1Q10567 949 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 DHX38Q92620 1227 aaKnown RBP12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 OSBPL9Q96SU4 736 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 MMTAG2Q9BU76 263 aaKnown RBP12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 CDCA7Q9BWT1 371 aaPredicted RBP12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 POLIQ9UNA4 740 aa12.98□□□□□ -0.33
SEMA6A-202ENST00000343348 K7ERI5 159 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 ZBTB22O15209 634 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 LBRQ14739 615 aaKnown RBP12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 C1orf228Q6PIY5 440 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 RFWD2Q8NHY2 731 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 NUP85Q9BW27 656 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 AP5M1Q9H0R1 490 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 USP21Q9UK80 565 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 ATP10BO94823 1461 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 CTTNBP2Q8WZ74 1663 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 KDM1AO60341 852 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 PYGBP11216 843 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 FGFR4P22455 802 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 ARL13BQ3SXY8 428 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 IFT43Q96FT9 208 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 TTC25Q96NG3 672 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 ASAP1Q9ULH1 1129 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 BRAFP15056 766 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 MXD4Q14582 209 aaPredicted RBP12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 CDC37Q16543 378 aaPredicted RBP12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 PRPF38AQ8NAV1 312 aaKnown RBP12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 MYOM2P54296 1465 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 POTEMA6NI47 508 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 PIK3R2O00459 728 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 AARSP49588 968 aaKnown RBP eCLIP12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 ALDH18A1P54886 795 aaKnown RBP12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 PSMD2Q13200 908 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 MKRN4PQ13434 485 aaPredicted RBP12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 KDELC2Q7Z4H8 507 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 ZFYVE19Q96K21 471 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 FAM49AQ9H0Q0 323 aaPredicted RBP12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 MID2Q9UJV3 735 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 LOC102724159A0A0B4J2E5 919 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 PJA2O43164 708 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 CCDC159P0C7I6 412 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 SKOR1P84550 965 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 SEPT2Q15019 361 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 PWP2Q15269 919 aaKnown RBP12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 LZICQ8WZA0 190 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 ZRANB2O95218 330 aaKnown RBP eCLIP12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 CUL4AQ13619 759 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 C1orf54Q8WWF1 131 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 MS4A14Q96JA4 679 aa12.97□□□□□ -0.33
SEMA6A-202ENST00000343348 ZNF185O15231 689 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 PCP11498 1178 aaKnown RBP12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 VCAM1P19320 739 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 KCNA4P22459 653 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 LRRC63Q05C16 580 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 NBPF10Q6P3W6 841 aaKnown RBP12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 ANKMY2Q8IV38 441 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 AURKCQ9UQB9 309 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 PRPF3O43395 683 aaKnown RBP12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 TMEM270Q6UE05 265 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 DDIASQ8IXT1 998 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 ZBED8Q8IZ13 594 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 TMEM247A6NEH6 219 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 ENO1P06733 434 aaKnown RBP12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 CRKLP46109 303 aaKnown RBP12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 NEK2P51955 445 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 ARFIP2P53365 341 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 PDIA2Q13087 525 aaKnown RBP12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 CUL3Q13618 768 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 NCAPHQ15003 741 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 CCDC144BQ3MJ40 725 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 TEX2Q8IWB9 1127 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 TRIM33Q9UPN9 1127 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 ASXL2Q76L83 1435 aa12.96□□□□□ -0.33
SEMA6A-202ENST00000343348 PSAPP07602 524 aa12.96□□□□□ -0.34
SEMA6A-202ENST00000343348 NME3Q13232 169 aa12.96□□□□□ -0.34
SEMA6A-202ENST00000343348 RNF123Q5XPI4 1314 aa12.96□□□□□ -0.34
SEMA6A-202ENST00000343348 RHOT2Q8IXI1 618 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms