RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 PFKFB3Q16875 520 aaPredicted RBP16.65■□□□□ 0.26
LIMK2-203ENST00000340552 CC2D2BQ6DHV5 1058 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 SCFD2Q8WU76 684 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 TBC1D5Q92609 795 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 ANKRD27Q96NW4 1050 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 PYM1Q9BRP8 204 aaKnown RBP16.65■□□□□ 0.26
LIMK2-203ENST00000340552 RAB17Q9H0T7 212 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 PCMTD2Q9NV79 361 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 PNMA3Q9UL41 463 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 SNX3O60493 162 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 GNAQP50148 359 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 FKBP1AP62942 108 aaKnown RBP16.64■□□□□ 0.25
LIMK2-203ENST00000340552 GABPAQ06546 454 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 CUL3Q13618 768 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 PLS1Q14651 629 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 TNFRSF25Q93038 417 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 CEP95Q96GE4 821 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 AP1M1Q9BXS5 423 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 TRIM4Q9C037 500 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 DDX47Q9H0S4 455 aaKnown RBP16.64■□□□□ 0.25
LIMK2-203ENST00000340552 VEGFAP15692 232 aaPredicted RBP16.64■□□□□ 0.25
LIMK2-203ENST00000340552 LBRQ14739 615 aaKnown RBP16.64■□□□□ 0.25
LIMK2-203ENST00000340552 NAALADL2Q58DX5 795 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 ASRGL1Q7L266 308 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 ATL2Q8NHH9 583 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 FBXO41Q8TF61 875 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 BAP1Q92560 729 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 MMRN2Q9H8L6 949 aa16.64■□□□□ 0.25
LIMK2-203ENST00000340552 ABLIM1O14639 778 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 PPFIA2O75334 1257 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 RHOBTB3O94955 611 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 OAS1P00973 400 aaKnown RBP16.63■□□□□ 0.25
LIMK2-203ENST00000340552 PCK1P35558 622 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 IFNAR2P48551 515 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 NAB2Q15742 525 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 NPY5RQ15761 445 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 SGSM1Q2NKQ1 1148 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 CCDC38Q502W7 563 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 RNF220Q5VTB9 566 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 HGSNATQ68CP4 663 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 P2RX5Q93086 422 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 ZDHHC15Q96MV8 337 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 RPS6KC1Q96S38 1066 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 INTS9Q9NV88 658 aaKnown RBP16.63■□□□□ 0.25
LIMK2-203ENST00000340552 C10orf71Q711Q0 1435 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 KCNK3O14649 394 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 MCM7P33993 719 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 NFIAQ12857 509 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 HHATQ5VTY9 493 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 SUPT20HQ8NEM7 779 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 DHTKD1Q96HY7 919 aaPredicted RBP16.63■□□□□ 0.25
LIMK2-203ENST00000340552 SERPINB13Q9UIV8 391 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 PCDHAC2Q9Y5I4 1007 aa16.63■□□□□ 0.25
LIMK2-203ENST00000340552 CCNE1P24864 410 aa16.62■□□□□ 0.25
LIMK2-203ENST00000340552 NLRP5P59047 1200 aa16.62■□□□□ 0.25
LIMK2-203ENST00000340552 LMNTD2Q8IXW0 634 aa16.62■□□□□ 0.25
LIMK2-203ENST00000340552 SLC17A8Q8NDX2 589 aa16.62■□□□□ 0.25
LIMK2-203ENST00000340552 MRIQ9BWK5 157 aa16.62■□□□□ 0.25
LIMK2-203ENST00000340552 ATP8A1Q9Y2Q0 1164 aa16.62■□□□□ 0.25
LIMK2-203ENST00000340552 RBAK-RBAKDNI3L0D1 243 aa16.62■□□□□ 0.25
LIMK2-203ENST00000340552 ATP6V1C1P21283 382 aa16.62■□□□□ 0.25
LIMK2-203ENST00000340552 SP100P23497 879 aaPredicted RBP16.62■□□□□ 0.25
LIMK2-203ENST00000340552 TDRD12Q587J7 1177 aaKnown RBP16.62■□□□□ 0.25
LIMK2-203ENST00000340552 TMEM154Q6P9G4 183 aa16.62■□□□□ 0.25
LIMK2-203ENST00000340552 FAM114A1Q8IWE2 563 aa16.62■□□□□ 0.25
LIMK2-203ENST00000340552 IQCDQ96DY2 449 aa16.62■□□□□ 0.25
LIMK2-203ENST00000340552 CCDC134Q9H6E4 229 aa16.62■□□□□ 0.25
LIMK2-203ENST00000340552 ZNF646O15015 1829 aaPredicted RBP16.62■□□□□ 0.25
LIMK2-203ENST00000340552 PALM3A6NDB9 673 aaPredicted RBP16.61■□□□□ 0.25
LIMK2-203ENST00000340552 HIP1RO75146 1068 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 GOLGA8HP0CJ92 632 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 RFC5P40937 340 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 POLE2P56282 527 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 LRRC23Q53EV4 343 aaPredicted RBP16.61■□□□□ 0.25
LIMK2-203ENST00000340552 NCAPG2Q86XI2 1143 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 TTLL6Q8N841 843 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 NSRP1Q9H0G5 558 aaKnown RBP16.61■□□□□ 0.25
LIMK2-203ENST00000340552 DISC1Q9NRI5 854 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 AMACRQ9UHK6 382 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 USP15Q9Y4E8 981 aaPredicted RBP16.61■□□□□ 0.25
LIMK2-203ENST00000340552 CYTH3O43739 400 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 WFS1O76024 890 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 HLA-DOAP06340 250 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 IFI35P80217 286 aaPredicted RBP16.61■□□□□ 0.25
LIMK2-203ENST00000340552 SLC35G1Q2M3R5 365 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 PDXDC1Q6P996 788 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 APLFQ8IW19 511 aaPredicted RBP16.61■□□□□ 0.25
LIMK2-203ENST00000340552 PHC3Q8NDX5 983 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 IFT74Q96LB3 600 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 PLIN2Q99541 437 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 UBE2OQ9C0C9 1292 aaKnown RBP16.61■□□□□ 0.25
LIMK2-203ENST00000340552 DPH5Q9H2P9 285 aa16.61■□□□□ 0.25
LIMK2-203ENST00000340552 SSU72P8A0A1W2PR75 194 aa16.6■□□□□ 0.25
LIMK2-203ENST00000340552 CEP104O60308 925 aa16.6■□□□□ 0.25
LIMK2-203ENST00000340552 NOVP48745 357 aa16.6■□□□□ 0.25
LIMK2-203ENST00000340552 EIF3BP55884 814 aaKnown RBP16.6■□□□□ 0.25
LIMK2-203ENST00000340552 KIAA0753Q2KHM9 967 aa16.6■□□□□ 0.25
LIMK2-203ENST00000340552 HOOK3Q86VS8 718 aa16.6■□□□□ 0.25
LIMK2-203ENST00000340552 TAF4BQ92750 862 aa16.6■□□□□ 0.25
LIMK2-203ENST00000340552 GPKOWQ92917 476 aaPredicted RBP eCLIP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms