RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TMOD1P28289 359 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 HOXD11P31277 338 aaPredicted RBP17.09■□□□□ 0.33
PRKN-201ENST00000338468 YWHABP31946 246 aaKnown RBP17.09■□□□□ 0.33
PRKN-201ENST00000338468 GPC3P51654 580 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 GNL2Q13823 731 aaKnown RBP17.09■□□□□ 0.33
PRKN-201ENST00000338468 ZNF668Q96K58 619 aaPredicted RBP17.09■□□□□ 0.33
PRKN-201ENST00000338468 MAP7D2Q96T17 732 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 ZSWIM4Q9H7M6 989 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 RC3H2Q9HBD1 1191 aaKnown RBP17.09■□□□□ 0.33
PRKN-201ENST00000338468 ST3GAL5Q9UNP4 418 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 SMC3Q9UQE7 1217 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 KIF3AQ9Y496 699 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 INSL6Q9Y581 213 aa17.09■□□□□ 0.33
PRKN-201ENST00000338468 ARID2Q68CP9 1835 aa17.08■□□□□ 0.33
PRKN-201ENST00000338468 DKC1O60832 514 aaKnown RBP eCLIP17.08■□□□□ 0.322e-6■■■■■ 33.3
PRKN-201ENST00000338468 LYPLA2O95372 231 aa17.08■□□□□ 0.32
PRKN-201ENST00000338468 OR52Z1P0C646 297 aa17.08■□□□□ 0.32
PRKN-201ENST00000338468 SPATA31C1P0DKV0 1188 aa17.08■□□□□ 0.32
PRKN-201ENST00000338468 NFX1Q12986 1120 aaKnown RBP17.08■□□□□ 0.32
PRKN-201ENST00000338468 TPH2Q8IWU9 490 aa17.08■□□□□ 0.32
PRKN-201ENST00000338468 CEP170P1Q96L14 293 aa17.08■□□□□ 0.32
PRKN-201ENST00000338468 FTHL17Q9BXU8 183 aa17.08■□□□□ 0.32
PRKN-201ENST00000338468 DHX33Q9H6R0 707 aaKnown RBP17.08■□□□□ 0.32
PRKN-201ENST00000338468 PCDHB6Q9Y5E3 794 aa17.08■□□□□ 0.32
PRKN-201ENST00000338468 ERVK-21P61565 698 aa17.07■□□□□ 0.32
PRKN-201ENST00000338468 TMEM31Q5JXX7 168 aa17.07■□□□□ 0.32
PRKN-201ENST00000338468 ARNTL2Q8WYA1 636 aa17.07■□□□□ 0.32
PRKN-201ENST00000338468 HLA-CQ95604 372 aa17.07■□□□□ 0.32
PRKN-201ENST00000338468 LRFN3Q9BTN0 628 aa17.07■□□□□ 0.32
PRKN-201ENST00000338468 NOL7Q9UMY1 257 aaKnown RBP17.07■□□□□ 0.32
PRKN-201ENST00000338468 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.07■□□□□ 0.32
PRKN-201ENST00000338468 A0A087WWV3 80 aa17.06■□□□□ 0.32
PRKN-201ENST00000338468 GPR182O15218 404 aa17.06■□□□□ 0.32
PRKN-201ENST00000338468 LPXNO60711 386 aa17.06■□□□□ 0.32
PRKN-201ENST00000338468 MED24O75448 989 aa17.06■□□□□ 0.32
PRKN-201ENST00000338468 DARSP14868 501 aaKnown RBP17.06■□□□□ 0.32
PRKN-201ENST00000338468 EIF4BP23588 611 aaKnown RBP17.06■□□□□ 0.32
PRKN-201ENST00000338468 TECP42680 631 aa17.06■□□□□ 0.32
PRKN-201ENST00000338468 DSC3Q14574 896 aa17.06■□□□□ 0.32
PRKN-201ENST00000338468 MCTP1Q6DN14 999 aa17.06■□□□□ 0.32
PRKN-201ENST00000338468 KSR1Q8IVT5 923 aa17.06■□□□□ 0.32
PRKN-201ENST00000338468 ZNF710Q8N1W2 664 aa17.06■□□□□ 0.32
PRKN-201ENST00000338468 NEK9Q8TD19 979 aa17.06■□□□□ 0.32
PRKN-201ENST00000338468 ZNF689Q96CS4 500 aaPredicted RBP17.06■□□□□ 0.32
PRKN-201ENST00000338468 YME1L1Q96TA2 773 aa17.06■□□□□ 0.32
PRKN-201ENST00000338468 EPHX3Q9H6B9 360 aa17.06■□□□□ 0.32
PRKN-201ENST00000338468 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.06■□□□□ 0.32
PRKN-201ENST00000338468 SUCLA2Q9P2R7 463 aaPredicted RBP17.06■□□□□ 0.32
PRKN-201ENST00000338468 PPME1Q9Y570 386 aa17.06■□□□□ 0.32
PRKN-201ENST00000338468 COL4A4P53420 1690 aaPredicted RBP17.06■□□□□ 0.32
PRKN-201ENST00000338468 CSDE1O75534 798 aaKnown RBP17.05■□□□□ 0.32
PRKN-201ENST00000338468 DGKIO75912 1065 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 LINC00271P0C7V0 271 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 RFC5P40937 340 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 PTGDRQ13258 359 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 IL17AQ16552 155 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 XKR9Q5GH70 373 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 LARP1BQ659C4 914 aaKnown RBP17.05■□□□□ 0.32
PRKN-201ENST00000338468 OTUD6AQ7L8S5 288 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 CATSPER3Q86XQ3 398 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 PIGOQ8TEQ8 1089 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 TMEM143Q96AN5 459 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 TGS1Q96RS0 853 aaKnown RBP17.05■□□□□ 0.32
PRKN-201ENST00000338468 ADAM2Q99965 735 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 C17orf80Q9BSJ5 609 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 XPNPEP1Q9NQW7 623 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 RGS18Q9NS28 235 aa17.05■□□□□ 0.32
PRKN-201ENST00000338468 BMP2KQ9NSY1 1161 aaPredicted RBP17.05■□□□□ 0.32
PRKN-201ENST00000338468 A0A087WZ62 844 aa17.04■□□□□ 0.32
PRKN-201ENST00000338468 C9IYK1 514 aa17.04■□□□□ 0.32
PRKN-201ENST00000338468 H3BQV1 296 aa17.04■□□□□ 0.32
PRKN-201ENST00000338468 FGFR4P22455 802 aa17.04■□□□□ 0.32
PRKN-201ENST00000338468 DNM2P50570 870 aa17.04■□□□□ 0.32
PRKN-201ENST00000338468 FXR2P51116 673 aaKnown RBP eCLIP17.04■□□□□ 0.32
PRKN-201ENST00000338468 POLGP54098 1239 aaPredicted RBP17.04■□□□□ 0.32
PRKN-201ENST00000338468 EMC2Q15006 297 aa17.04■□□□□ 0.32
PRKN-201ENST00000338468 FAM43BQ6ZT52 329 aaPredicted RBP17.04■□□□□ 0.32
PRKN-201ENST00000338468 RHPN2Q8IUC4 686 aa17.04■□□□□ 0.32
PRKN-201ENST00000338468 NPAS4Q8IUM7 802 aa17.04■□□□□ 0.32
PRKN-201ENST00000338468 NLRP7Q8WX94 980 aa17.04■□□□□ 0.32
PRKN-201ENST00000338468 SLC7A3Q8WY07 619 aa17.04■□□□□ 0.32
PRKN-201ENST00000338468 JPH2Q9BR39 696 aaPredicted RBP17.04■□□□□ 0.32
PRKN-201ENST00000338468 FDXACB1Q9BRP7 624 aaPredicted RBP17.04■□□□□ 0.32
PRKN-201ENST00000338468 POLR3CQ9BUI4 534 aaPredicted RBP17.04■□□□□ 0.32
PRKN-201ENST00000338468 TUFT1Q9NNX1 390 aa17.04■□□□□ 0.32
PRKN-201ENST00000338468 ANKEF1Q9NU02 776 aa17.04■□□□□ 0.32
PRKN-201ENST00000338468 MTUS1Q9ULD2 1270 aa17.04■□□□□ 0.32
PRKN-201ENST00000338468 SARSP49591 514 aaKnown RBP17.03■□□□□ 0.32
PRKN-201ENST00000338468 RARRES1P49788 294 aa17.03■□□□□ 0.32
PRKN-201ENST00000338468 GATMP50440 423 aa17.03■□□□□ 0.32
PRKN-201ENST00000338468 FAM189BP81408 668 aa17.03■□□□□ 0.32
PRKN-201ENST00000338468 GRB10Q13322 594 aa17.03■□□□□ 0.32
PRKN-201ENST00000338468 ECM1Q16610 540 aa17.03■□□□□ 0.32
PRKN-201ENST00000338468 ODR4Q5SWX8 454 aa17.03■□□□□ 0.32
PRKN-201ENST00000338468 ZNF410Q86VK4 478 aa17.03■□□□□ 0.32
PRKN-201ENST00000338468 PRPF31Q8WWY3 499 aaKnown RBP17.03■□□□□ 0.32
PRKN-201ENST00000338468 IFT122Q9HBG6 1241 aa17.03■□□□□ 0.32
PRKN-201ENST00000338468 ADGRA3Q8IWK6 1321 aa17.02■□□□□ 0.32
PRKN-201ENST00000338468 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.32
PRKN-201ENST00000338468 RPA1P27694 616 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms