RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 FAM47CQ5HY64 1035 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 CEP128Q6ZU80 1094 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 SPATA4Q8NEY3 305 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 NUDT12Q9BQG2 462 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 GGA3Q9NZ52 723 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 SLC9A2Q9UBY0 812 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 MIF4GDA9UHW6 222 aaKnown RBP6.8□□□□□ -1.32
PRKDC-202ENST00000338368 GNGT1P63211 74 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 ZNF394Q53GI3 561 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 C10orf67Q8IYJ2 551 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 PACSIN2Q9UNF0 486 aaPredicted RBP6.8□□□□□ -1.32
PRKDC-202ENST00000338368 CNOT8Q9UFF9 292 aaKnown RBP6.8□□□□□ -1.32
PRKDC-202ENST00000338368 VIMP08670 466 aaKnown RBP6.8□□□□□ -1.32
PRKDC-202ENST00000338368 GPC5P78333 572 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 BFSP1Q12934 665 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 DNAJC7Q99615 494 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 MSTO1Q9BUK6 570 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 UNC45AQ9H3U1 944 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 PPANQ9NQ55 473 aaKnown RBP6.8□□□□□ -1.32
PRKDC-202ENST00000338368 WNT7AO00755 349 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 NEDD9Q14511 834 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 MAPK6Q16659 721 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 TAOK1Q7L7X3 1001 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 KCNK18Q7Z418 384 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 PSPC1Q8WXF1 523 aaKnown RBP6.79□□□□□ -1.32
PRKDC-202ENST00000338368 PDCD2LQ9BRP1 358 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 TIPINQ9BVW5 301 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 MRPL47Q9HD33 250 aaKnown RBP6.79□□□□□ -1.32
PRKDC-202ENST00000338368 FAM114A2Q9NRY5 505 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 HAUS2Q9NVX0 235 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 HACL1Q9UJ83 578 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 LRRC10BA6NIK2 292 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 ATF7P17544 494 aaPredicted RBP6.79□□□□□ -1.32
PRKDC-202ENST00000338368 ATP5DP30049 168 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 SNX1Q13596 522 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 FBXL13Q8NEE6 735 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 NKX2-3Q8TAU0 364 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 KRT15P19012 456 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 CD58P19256 250 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 HSPA6P17066 643 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 GABPAQ06546 454 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 SGO2Q562F6 1265 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 HOMER3Q9NSC5 361 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 SNX12Q9UMY4 172 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 SLC16A3O15427 465 aaKnown RBP6.79□□□□□ -1.32
PRKDC-202ENST00000338368 CTIFO43310 598 aaKnown RBP6.79□□□□□ -1.32
PRKDC-202ENST00000338368 MARK3P27448 753 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 UAP1Q16222 522 aaPredicted RBP6.79□□□□□ -1.32
PRKDC-202ENST00000338368 EMBQ6PCB8 327 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 PPP1R14CQ8TAE6 165 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 KIF1AQ12756 1690 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 RSPH10B2B2RC85 870 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 RSPH10BP0C881 870 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 ERVK-24P63145 666 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 SLC30A10Q6XR72 485 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 GPD1LQ8N335 351 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 PPP1R16BQ96T49 567 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 SAMD15Q9P1V8 674 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 PTPN22Q9Y2R2 807 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 PASKQ96RG2 1323 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 ICAM1P05362 532 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 TGFB2P61812 414 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 PPP1R2P3Q6NXS1 205 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 CCDC121Q6ZUS5 278 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 TCP11Q8WWU5 503 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 FAM167AQ96KS9 214 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 DUSP9Q99956 384 aaKnown RBP6.79□□□□□ -1.32
PRKDC-202ENST00000338368 NFU1Q9UMS0 254 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 PCDHAC2Q9Y5I4 1007 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 GOLGA8SH3BPF8 625 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 PPFIA4O75335 1185 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 PLS3P13797 630 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 SOX5P35711 763 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 CASP4P49662 377 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 TERF2Q15554 542 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 SPDYE2Q495Y8 402 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 KAZNQ674X7 775 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 RUNDC3BQ96NL0 473 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 KCND2Q9NZV8 630 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 STIM2Q9P246 746 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 DAPK3O43293 454 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 STAM2O75886 525 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 DGAT1O75907 488 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 MKRN3Q13064 507 aaKnown RBP6.79□□□□□ -1.32
PRKDC-202ENST00000338368 RBM46Q8TBY0 533 aaKnown RBP6.79□□□□□ -1.32
PRKDC-202ENST00000338368 ANKRD7Q92527 254 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 MTMR9Q96QG7 549 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 AGPAT1Q99943 283 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 FMO5P49326 533 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 GALCP54803 685 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 RPS6P62753 249 aaKnown RBP6.79□□□□□ -1.32
PRKDC-202ENST00000338368 TKFCQ3LXA3 575 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 DENND2CQ68D51 928 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 ZKSCAN4Q969J2 545 aaPredicted RBP6.79□□□□□ -1.32
PRKDC-202ENST00000338368 MKNK1Q9BUB5 465 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 VPS37BQ9H9H4 285 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 ATP6V0A4Q9HBG4 840 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 PLCB1Q9NQ66 1216 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 TXNDC16Q9P2K2 825 aa6.79□□□□□ -1.32
PRKDC-202ENST00000338368 DIS3Q9Y2L1 958 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms