RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 SH3BP5LQ7L8J4 393 aa21.64■■□□□ 1.05
CDCA4-201ENST00000336219 U2AF1L4Q8WU68 220 aaKnown RBP21.64■■□□□ 1.05
CDCA4-201ENST00000336219 IKZF4Q9H2S9 585 aa21.64■■□□□ 1.05
CDCA4-201ENST00000336219 FAM198AQ9UFP1 575 aa21.64■■□□□ 1.05
CDCA4-201ENST00000336219 STXBP5LQ9Y2K9 1186 aa21.64■■□□□ 1.05
CDCA4-201ENST00000336219 ATP8B3O60423 1300 aa21.64■■□□□ 1.05
CDCA4-201ENST00000336219 ANKRD20A8PQ5CZ79 823 aa21.63■■□□□ 1.05
CDCA4-201ENST00000336219 RUFY4Q6ZNE9 571 aa21.63■■□□□ 1.05
CDCA4-201ENST00000336219 POLR3CQ9BUI4 534 aaPredicted RBP21.63■■□□□ 1.05
CDCA4-201ENST00000336219 GCNT4Q9P109 453 aa21.63■■□□□ 1.05
CDCA4-201ENST00000336219 ATP8A1Q9Y2Q0 1164 aa21.63■■□□□ 1.05
CDCA4-201ENST00000336219 DDX3XO00571 662 aaKnown RBP eCLIP21.63■■□□□ 1.057e-18■■■□□ 18.4
CDCA4-201ENST00000336219 TBCAO75347 108 aaKnown RBP21.63■■□□□ 1.05
CDCA4-201ENST00000336219 KCNA1Q09470 495 aa21.63■■□□□ 1.05
CDCA4-201ENST00000336219 BIRC3Q13489 604 aa21.63■■□□□ 1.05
CDCA4-201ENST00000336219 SLC27A3Q5K4L6 730 aa21.63■■□□□ 1.05
CDCA4-201ENST00000336219 TMEM179Q6ZVK1 233 aa21.63■■□□□ 1.05
CDCA4-201ENST00000336219 GMCL1P1Q8NEA9 526 aa21.63■■□□□ 1.05
CDCA4-201ENST00000336219 CYP2W1Q8TAV3 490 aa21.63■■□□□ 1.05
CDCA4-201ENST00000336219 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.63■■□□□ 1.051e-5■■■□□ 18.7
CDCA4-201ENST00000336219 GMCL1Q96IK5 515 aa21.63■■□□□ 1.05
CDCA4-201ENST00000336219 CALR3Q96L12 384 aaKnown RBP21.63■■□□□ 1.05
CDCA4-201ENST00000336219 EIF2AK1Q9BQI3 630 aaKnown RBP21.63■■□□□ 1.05
CDCA4-201ENST00000336219 RABGAP1Q9Y3P9 1069 aa21.63■■□□□ 1.05
CDCA4-201ENST00000336219 F8VZ95 297 aa21.62■■□□□ 1.05
CDCA4-201ENST00000336219 OPLAHO14841 1288 aa21.62■■□□□ 1.05
CDCA4-201ENST00000336219 EYA4O95677 639 aa21.62■■□□□ 1.05
CDCA4-201ENST00000336219 NDUFB10O96000 172 aa21.62■■□□□ 1.05
CDCA4-201ENST00000336219 TAL1P17542 331 aaPredicted RBP21.62■■□□□ 1.05
CDCA4-201ENST00000336219 SYDE2Q5VT97 1194 aa21.62■■□□□ 1.05
CDCA4-201ENST00000336219 NT5DC3Q86UY8 548 aa21.62■■□□□ 1.05
CDCA4-201ENST00000336219 IDI2Q9BXS1 227 aa21.62■■□□□ 1.05
CDCA4-201ENST00000336219 KCNQ5Q9NR82 932 aa21.62■■□□□ 1.05
CDCA4-201ENST00000336219 OLFML3Q9NRN5 406 aa21.62■■□□□ 1.05
CDCA4-201ENST00000336219 GGA2Q9UJY4 613 aa21.62■■□□□ 1.05
CDCA4-201ENST00000336219 CLIC2O15247 247 aa21.62■■□□□ 1.05
CDCA4-201ENST00000336219 GFPT2O94808 682 aa21.62■■□□□ 1.05
CDCA4-201ENST00000336219 KIAA0825Q8IV33 1275 aa21.62■■□□□ 1.05
CDCA4-201ENST00000336219 EIF1ADQ8N9N8 165 aaKnown RBP21.62■■□□□ 1.05
CDCA4-201ENST00000336219 SMCHD1A6NHR9 2005 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 GTPBP10A4D1E9 387 aaKnown RBP21.61■■□□□ 1.05
CDCA4-201ENST00000336219 EML1O00423 815 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 CHUKO15111 745 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 FGGP02679 453 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 SHBGP04278 402 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 NPR1P16066 1061 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 HOXA13P31271 388 aaPredicted RBP21.61■■□□□ 1.05
CDCA4-201ENST00000336219 IKQ13123 557 aaPredicted RBP21.61■■□□□ 1.05
CDCA4-201ENST00000336219 RGL1Q9NZL6 768 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 PCDHB13Q9Y5F0 798 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 SRRM3A6NNA2 597 aaPredicted RBP21.61■■□□□ 1.05
CDCA4-201ENST00000336219 TGFB1I1O43294 461 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 GDF11O95390 407 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 H2AFZP0C0S5 128 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 PRPF4BQ13523 1007 aaKnown RBP21.61■■□□□ 1.05
CDCA4-201ENST00000336219 AGBL2Q5U5Z8 902 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 H2AFVQ71UI9 128 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 SLFN11Q7Z7L1 901 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 VPS36Q86VN1 386 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 FAM228AQ86W67 206 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 RASGEF1CQ8N431 466 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 ATP8B4Q8TF62 1192 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 BORCS6Q96GS4 357 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 DBNDD1Q9H9R9 158 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 PNMA2Q9UL42 364 aa21.61■■□□□ 1.05
CDCA4-201ENST00000336219 A0A0A6YYK5 440 aaPredicted RBP21.6■■□□□ 1.05
CDCA4-201ENST00000336219 CAND2O75155 1236 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 PLCB4Q15147 1175 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 UBAP2Q5T6F2 1119 aaKnown RBP21.6■■□□□ 1.05
CDCA4-201ENST00000336219 RINT1Q6NUQ1 792 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 CYB5D1Q6P9G0 228 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 FUKQ8N0W3 1084 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 IGSF9BQ9UPX0 1349 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 CCDC188H7C350 402 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 CYP3A4P08684 503 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 GAP43P17677 238 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 SCTRP47872 440 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 GALCP54803 685 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 IFFO1Q0D2I5 559 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 DCAF12L1Q5VU92 463 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 PODNQ7Z5L7 613 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 SEPT12Q8IYM1 358 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 CACNA2D3Q8IZS8 1091 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 LNX1Q8TBB1 728 aaPredicted RBP21.6■■□□□ 1.05
CDCA4-201ENST00000336219 TATDN2Q93075 761 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 MRIQ9BWK5 157 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 INTUQ9ULD6 942 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 PPP1R9AQ9ULJ8 1098 aa21.6■■□□□ 1.05
CDCA4-201ENST00000336219 ZMYM2Q9UBW7 1377 aa21.59■■□□□ 1.05
CDCA4-201ENST00000336219 SFI1A8K8P3 1242 aa21.59■■□□□ 1.05
CDCA4-201ENST00000336219 ONECUT3O60422 494 aaPredicted RBP21.59■■□□□ 1.05
CDCA4-201ENST00000336219 BUB1BO60566 1050 aaPredicted RBP21.59■■□□□ 1.05
CDCA4-201ENST00000336219 ABCB4P21439 1286 aa21.59■■□□□ 1.05
CDCA4-201ENST00000336219 POLD1P28340 1107 aa21.59■■□□□ 1.05
CDCA4-201ENST00000336219 ZNF76P36508 570 aa21.59■■□□□ 1.05
CDCA4-201ENST00000336219 ZNF211Q13398 564 aaPredicted RBP21.59■■□□□ 1.05
CDCA4-201ENST00000336219 MTMR3Q13615 1198 aa21.59■■□□□ 1.05
CDCA4-201ENST00000336219 ABCB5Q2M3G0 1257 aa21.59■■□□□ 1.05
CDCA4-201ENST00000336219 CPLX4Q7Z7G2 160 aa21.59■■□□□ 1.05
CDCA4-201ENST00000336219 KCTD17Q8N5Z5 321 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms