RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 ZHX2Q9Y6X8 837 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 EIF3DO15371 548 aaKnown RBP eCLIP20.63■□□□□ 0.89
RFTN1-201ENST00000334133 PTGER2P43116 358 aa20.63■□□□□ 0.89
RFTN1-201ENST00000334133 MRPS9P82933 396 aaKnown RBP20.63■□□□□ 0.89
RFTN1-201ENST00000334133 TRAF1Q13077 416 aa20.63■□□□□ 0.89
RFTN1-201ENST00000334133 ZSCAN26Q16670 478 aa20.63■□□□□ 0.89
RFTN1-201ENST00000334133 PRAMEF18Q5VWM3 479 aa20.63■□□□□ 0.89
RFTN1-201ENST00000334133 LNX1Q8TBB1 728 aaPredicted RBP20.63■□□□□ 0.89
RFTN1-201ENST00000334133 CLEC4DQ8WXI8 215 aa20.63■□□□□ 0.89
RFTN1-201ENST00000334133 TAF4BQ92750 862 aa20.63■□□□□ 0.89
RFTN1-201ENST00000334133 FLOT1O75955 427 aa20.63■□□□□ 0.89
RFTN1-201ENST00000334133 ICAM1P05362 532 aa20.63■□□□□ 0.89
RFTN1-201ENST00000334133 DNAJC21Q5F1R6 531 aaKnown RBP20.63■□□□□ 0.89
RFTN1-201ENST00000334133 PALB2Q86YC2 1186 aa20.63■□□□□ 0.89
RFTN1-201ENST00000334133 WNK4Q96J92 1243 aa20.63■□□□□ 0.89
RFTN1-201ENST00000334133 INPP4AQ96PE3 977 aaPredicted RBP20.63■□□□□ 0.89
RFTN1-201ENST00000334133 MED4Q9NPJ6 270 aa20.63■□□□□ 0.89
RFTN1-201ENST00000334133 MYH11P35749 1972 aa20.63■□□□□ 0.89
RFTN1-201ENST00000334133 UGCGQ16739 394 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 FOXR1Q6PIV2 292 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 CBWD1Q9BRT8 395 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 VIPAS39Q9H9C1 493 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 CHORDC1Q9UHD1 332 aaPredicted RBP20.62■□□□□ 0.89
RFTN1-201ENST00000334133 COL2A1P02458 1487 aaPredicted RBP20.62■□□□□ 0.89
RFTN1-201ENST00000334133 GOLGA8IPA6NC78 632 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 GOLGA8JA6NMD2 632 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 ATP9AO75110 1047 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 STAT1P42224 750 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 PPARDQ03181 441 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 NSMFQ6X4W1 530 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 PSMD1Q99460 953 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 RABEP2Q9H5N1 569 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 MYOZ2Q9NPC6 264 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 TAS2R14Q9NYV8 317 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 TSKSQ9UJT2 592 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 SYNPO2Q9UMS6 1093 aa20.62■□□□□ 0.89
RFTN1-201ENST00000334133 F8VZ95 297 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 H2AFZP0C0S5 128 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 ZNF131P52739 623 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 GALCP54803 685 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 NPEPPSP55786 919 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 TKFCQ3LXA3 575 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 PLA2G4FQ68DD2 849 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 H2AFVQ71UI9 128 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 INTS2Q9H0H0 1204 aaKnown RBP20.61■□□□□ 0.89
RFTN1-201ENST00000334133 DHX15O43143 795 aaKnown RBP20.61■□□□□ 0.89
RFTN1-201ENST00000334133 AARSP49588 968 aaKnown RBP eCLIP20.61■□□□□ 0.89
RFTN1-201ENST00000334133 SETQ01105 290 aaPredicted RBP20.61■□□□□ 0.89
RFTN1-201ENST00000334133 B3GNT9Q6UX72 402 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 DAAM2Q86T65 1068 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 PRPF38AQ8NAV1 312 aaKnown RBP20.61■□□□□ 0.89
RFTN1-201ENST00000334133 KIFC3Q9BVG8 833 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 BZW2Q9Y6E2 419 aaKnown RBP20.61■□□□□ 0.89
RFTN1-201ENST00000334133 KIF4AO95239 1232 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 HSD17B4P51659 736 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 RPS6P62753 249 aaKnown RBP20.61■□□□□ 0.89
RFTN1-201ENST00000334133 MYL7Q01449 175 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 SP4Q02446 784 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 ITIH3Q06033 890 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 MTMR1Q13613 665 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 MTMR2Q13614 643 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 PHLDB3Q6NSJ2 640 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 SAMD7Q7Z3H4 446 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 TPCN2Q8NHX9 752 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 PGAP2Q9UHJ9 254 aa20.61■□□□□ 0.89
RFTN1-201ENST00000334133 IGSF9BQ9UPX0 1349 aa20.6■□□□□ 0.89
RFTN1-201ENST00000334133 PHF20L1A8MW92 1017 aa20.6■□□□□ 0.89
RFTN1-201ENST00000334133 RAD51CO43502 376 aa20.6■□□□□ 0.89
RFTN1-201ENST00000334133 SOX5P35711 763 aa20.6■□□□□ 0.89
RFTN1-201ENST00000334133 PRKCIP41743 596 aa20.6■□□□□ 0.89
RFTN1-201ENST00000334133 GCLMP48507 274 aa20.6■□□□□ 0.89
RFTN1-201ENST00000334133 SOX10P56693 466 aa20.6■□□□□ 0.89
RFTN1-201ENST00000334133 TTC19Q6DKK2 380 aaPredicted RBP20.6■□□□□ 0.89
RFTN1-201ENST00000334133 MSL3Q8N5Y2 521 aaKnown RBP20.6■□□□□ 0.89
RFTN1-201ENST00000334133 CCDC43Q96MW1 224 aaKnown RBP20.6■□□□□ 0.89
RFTN1-201ENST00000334133 ATAD5Q96QE3 1844 aa20.6■□□□□ 0.89
RFTN1-201ENST00000334133 TESPA1A2RU30 521 aaPredicted RBP20.6■□□□□ 0.89
RFTN1-201ENST00000334133 USP8P40818 1118 aa20.6■□□□□ 0.89
RFTN1-201ENST00000334133 PEX26Q7Z412 305 aa20.6■□□□□ 0.89
RFTN1-201ENST00000334133 ADAT2Q7Z6V5 191 aaKnown RBP20.6■□□□□ 0.89
RFTN1-201ENST00000334133 VPS36Q86VN1 386 aa20.6■□□□□ 0.89
RFTN1-201ENST00000334133 LRRC57Q8N9N7 239 aa20.6■□□□□ 0.89
RFTN1-201ENST00000334133 SYTL5Q8TDW5 730 aaPredicted RBP20.6■□□□□ 0.89
RFTN1-201ENST00000334133 AFAP1L1Q8TED9 768 aa20.6■□□□□ 0.89
RFTN1-201ENST00000334133 SLC16A4O15374 487 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 TBC1D12O60347 775 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 BFSP1Q12934 665 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 NAA35Q5VZE5 725 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 DDX42Q86XP3 938 aaKnown RBP eCLIP20.59■□□□□ 0.89
RFTN1-201ENST00000334133 METTL13Q8N6R0 699 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 USP38Q8NB14 1042 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 GPR88Q9GZN0 384 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 ACP6Q9NPH0 428 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 ODF2LQ9ULJ1 636 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 EMSYQ7Z589 1322 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 FOXN3O00409 490 aaPredicted RBP20.59■□□□□ 0.89
RFTN1-201ENST00000334133 RARRES1P49788 294 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 FAM83AQ86UY5 434 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 GOLGA6L1Q8N7Z2 621 aa20.59■□□□□ 0.89
RFTN1-201ENST00000334133 CASKIN2Q8WXE0 1202 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms