RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 RAB30Q15771 203 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 TMEM164Q5U3C3 297 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 CHSY3Q70JA7 882 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 CD163Q86VB7 1156 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 SIX5Q8N196 739 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 DEFB123Q8N688 67 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 IL31RAQ8NI17 732 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 CCDC12Q8WUD4 166 aaPredicted RBP7.25□□□□□ -1.25
SMG1-201ENST00000330588 SPATA33Q96N06 139 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.25□□□□□ -1.25
SMG1-201ENST00000330588 C16orf70Q9BSU1 422 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 TRPV6Q9H1D0 765 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 WNT8AQ9H1J5 351 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 BARHL2Q9NY43 387 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 NOP53Q9NZM5 478 aaKnown RBP7.25□□□□□ -1.25
SMG1-201ENST00000330588 BRPF3Q9ULD4 1205 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 UBIAD1Q9Y5Z9 338 aa7.25□□□□□ -1.25
SMG1-201ENST00000330588 DCDC2BA2VCK2 349 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 SPDYE3A6NKU9 549 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 STXBP3O00186 592 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 EFSO43281 561 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 PRPF3O43395 683 aaKnown RBP7.24□□□□□ -1.25
SMG1-201ENST00000330588 EFCAB14O75071 495 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 FGBP02675 491 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 FURINP09958 794 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 ACTN1P12814 892 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 CD33P20138 364 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 CYP2C18P33260 490 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 METAP2P50579 478 aaKnown RBP eCLIP7.24□□□□□ -1.25
SMG1-201ENST00000330588 ANAPC15P60006 121 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 COL9A3Q14050 684 aaPredicted RBP7.24□□□□□ -1.25
SMG1-201ENST00000330588 PFKFB3Q16875 520 aaPredicted RBP7.24□□□□□ -1.25
SMG1-201ENST00000330588 C16orf59Q7L2K0 433 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 TRIM50Q86XT4 487 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 PHOSPHO2Q8TCD6 241 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 ZNF274Q96GC6 653 aaPredicted RBP7.24□□□□□ -1.25
SMG1-201ENST00000330588 JAKMIP1Q96N16 626 aaKnown RBP7.24□□□□□ -1.25
SMG1-201ENST00000330588 RNF26Q9BY78 433 aaPredicted RBP7.24□□□□□ -1.25
SMG1-201ENST00000330588 ZMYND12Q9H0C1 365 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 MLXIPQ9HAP2 919 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 SH3GLB2Q9NR46 395 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 ZNF215Q9UL58 517 aaPredicted RBP7.24□□□□□ -1.25
SMG1-201ENST00000330588 USTQ9Y2C2 406 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 NFASCO94856 1347 aa7.24□□□□□ -1.25
SMG1-201ENST00000330588 MYH7BA7E2Y1 1941 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 MKI67P46013 3256 aaKnown RBP7.23□□□□□ -1.25
SMG1-201ENST00000330588 H3BRB1 525 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 CXCL10P02778 98 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 LGALS2P05162 132 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 CYP3A4P08684 503 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 IQCF3P0C7M6 154 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 GNAT1P11488 350 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 SCG2P13521 617 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 IFNAR1P17181 557 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 PTGS1P23219 599 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 SREBF1P36956 1147 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 ADCY7P51828 1080 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 NAPAP54920 295 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 SP2Q02086 613 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 DPYDQ12882 1025 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 PTGISQ16647 500 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 KIAA0753Q2KHM9 967 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 HSDL1Q3SXM5 330 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 ARSJQ5FYB0 599 aaPredicted RBP7.23□□□□□ -1.25
SMG1-201ENST00000330588 ZNF468Q5VIY5 522 aaPredicted RBP7.23□□□□□ -1.25
SMG1-201ENST00000330588 WWC2Q6AWC2 1192 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 USP17L6PQ6QN14 398 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 ZNF365Q70YC5 407 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 RUFY3Q7L099 469 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 HEATR3Q7Z4Q2 680 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 RPAINQ86UA6 219 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 ANKMY2Q8IV38 441 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 C7orf31Q8N865 590 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 CCDC148Q8NFR7 591 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 BICD2Q8TD16 824 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 TNPO1Q92973 898 aaKnown RBP7.23□□□□□ -1.25
SMG1-201ENST00000330588 CTAGE1Q96RT6 745 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 SLC9A7Q96T83 725 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 MDFIQ99750 246 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 TRAIPQ9BWF2 469 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 LRRC2Q9BYS8 371 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 TUT1Q9H6E5 874 aaKnown RBP7.23□□□□□ -1.25
SMG1-201ENST00000330588 JADE2Q9NQC1 790 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 TRMT13Q9NUP7 481 aaKnown RBP7.23□□□□□ -1.25
SMG1-201ENST00000330588 PCDHA6Q9UN73 950 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 PCDHA8Q9Y5H6 950 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 EMSYQ7Z589 1322 aa7.23□□□□□ -1.25
SMG1-201ENST00000330588 TRIOBPQ9H2D6 2365 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 BAZ2BQ9UIF8 2168 aaKnown RBP7.22□□□□□ -1.25
SMG1-201ENST00000330588 COL4A6Q14031 1691 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 UMODL1Q5DID0 1318 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 NOP56O00567 594 aaKnown RBP7.22□□□□□ -1.25
SMG1-201ENST00000330588 KHNYNO15037 678 aaKnown RBP7.22□□□□□ -1.25
SMG1-201ENST00000330588 SELPP16109 830 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 KCNA2P16389 499 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 RXRAP19793 462 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 GNA11P29992 359 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 CDC27P30260 824 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 SLC26A2P50443 739 aa7.22□□□□□ -1.25
SMG1-201ENST00000330588 ATP1A2P50993 1020 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms