RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 DDX42Q86XP3 938 aaKnown RBP eCLIP16.72■□□□□ 0.27
BRCC3-201ENST00000330045 FAM186BQ8IYM0 893 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 MICALL1Q8N3F8 863 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 LARGE2Q8N3Y3 721 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 MYCT1Q8N699 235 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 EFCC1Q9HA90 598 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 TMBIM4Q9HC24 238 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 SCAF8Q9UPN6 1271 aaKnown RBP16.72■□□□□ 0.27
BRCC3-201ENST00000330045 EVI5O60447 810 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 POLD1P28340 1107 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 NMT1P30419 496 aaKnown RBP16.72■□□□□ 0.27
BRCC3-201ENST00000330045 GALCP54803 685 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 CTTNQ14247 550 aaKnown RBP16.72■□□□□ 0.27
BRCC3-201ENST00000330045 PROCA1Q8NCQ7 364 aaPredicted RBP16.72■□□□□ 0.27
BRCC3-201ENST00000330045 MRIQ9BWK5 157 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 EPN3Q9H201 632 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 BMP3P12645 472 aa16.71■□□□□ 0.27
BRCC3-201ENST00000330045 ITGB3BPQ13352 177 aaPredicted RBP16.71■□□□□ 0.27
BRCC3-201ENST00000330045 HSD17B14Q9BPX1 270 aa16.71■□□□□ 0.27
BRCC3-201ENST00000330045 IKZF4Q9H2S9 585 aa16.71■□□□□ 0.27
BRCC3-201ENST00000330045 ZMYM2Q9UBW7 1377 aa16.71■□□□□ 0.27
BRCC3-201ENST00000330045 CLRN2A0PK11 232 aa16.71■□□□□ 0.26
BRCC3-201ENST00000330045 PPP1R37O75864 691 aa16.71■□□□□ 0.26
BRCC3-201ENST00000330045 SOX5P35711 763 aa16.71■□□□□ 0.26
BRCC3-201ENST00000330045 TPH2Q8IWU9 490 aa16.71■□□□□ 0.26
BRCC3-201ENST00000330045 SLC30A5Q8TAD4 765 aa16.71■□□□□ 0.26
BRCC3-201ENST00000330045 LNX1Q8TBB1 728 aaPredicted RBP16.71■□□□□ 0.26
BRCC3-201ENST00000330045 SLC16A10Q8TF71 515 aa16.71■□□□□ 0.26
BRCC3-201ENST00000330045 HES6Q96HZ4 224 aa16.71■□□□□ 0.26
BRCC3-201ENST00000330045 TUFT1Q9NNX1 390 aa16.71■□□□□ 0.26
BRCC3-201ENST00000330045 AMACRQ9UHK6 382 aa16.71■□□□□ 0.26
BRCC3-201ENST00000330045 AMFRQ9UKV5 643 aa16.71■□□□□ 0.26
BRCC3-201ENST00000330045 IGLV3-22A0A075B6J6 115 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 GCOM1H8Y6P7 765 aaPredicted RBP16.7■□□□□ 0.26
BRCC3-201ENST00000330045 SLITRK3O94933 977 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 MYZAPP0CAP1 466 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 ITGA4P13612 1032 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 MDH1P40925 334 aaKnown RBP16.7■□□□□ 0.26
BRCC3-201ENST00000330045 LIG3P49916 1009 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 UAP1Q16222 522 aaPredicted RBP16.7■□□□□ 0.26
BRCC3-201ENST00000330045 NFIL3Q16649 462 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 ZC2HC1CQ53FD0 456 aaPredicted RBP16.7■□□□□ 0.26
BRCC3-201ENST00000330045 C1orf186Q6ZWK4 172 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 OTOP1Q7RTM1 612 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 CCDC26Q8TAB7 109 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 STK33Q9BYT3 514 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 NEUROG2Q9H2A3 272 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 SLITRK6Q9H5Y7 841 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 F8VZ95 297 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 H0YGN5 161 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 PIK3CDO00329 1044 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 ERLIN2O94905 339 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 LMNB1P20700 586 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 CTNNA1P35221 906 aaKnown RBP16.7■□□□□ 0.26
BRCC3-201ENST00000330045 CC2D2BQ6DHV5 1058 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 BTNL9Q6UXG8 535 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 GLYCTKQ8IVS8 523 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 CDAN1Q8IWY9 1227 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 DYDC2Q96IM9 177 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 MKNK1Q9BUB5 465 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 CENPHQ9H3R5 247 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 PARVGQ9HBI0 331 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 DNAJC12Q9UKB3 198 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 NFS1Q9Y697 457 aa16.7■□□□□ 0.26
BRCC3-201ENST00000330045 FMO5P49326 533 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 JAG1P78504 1218 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 DRAP1Q14919 205 aaPredicted RBP16.69■□□□□ 0.26
BRCC3-201ENST00000330045 PTGISQ16647 500 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 SLC30A10Q6XR72 485 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 OSGEPQ9NPF4 335 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 DAPK3O43293 454 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 NPM3O75607 178 aaKnown RBP16.69■□□□□ 0.26
BRCC3-201ENST00000330045 INPP5BP32019 993 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 COG2Q14746 738 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 LRCH2Q5VUJ6 765 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 SPATS2Q86XZ4 545 aaKnown RBP16.69■□□□□ 0.26
BRCC3-201ENST00000330045 ARFGAP2Q8N6H7 521 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 SUPT20HQ8NEM7 779 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 OR2W6PQ8NHA6 318 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 OLIG1Q8TAK6 271 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 SLC35G2Q8TBE7 412 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 SERPINA10Q9UK55 444 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 PRR12Q9ULL5 1215 aa16.69■□□□□ 0.26
BRCC3-201ENST00000330045 ZBTB39O15060 712 aa16.68■□□□□ 0.26
BRCC3-201ENST00000330045 TTI1O43156 1089 aa16.68■□□□□ 0.26
BRCC3-201ENST00000330045 CHMP2AO43633 222 aa16.68■□□□□ 0.26
BRCC3-201ENST00000330045 BUB1BO60566 1050 aaPredicted RBP16.68■□□□□ 0.26
BRCC3-201ENST00000330045 GH2P01242 217 aa16.68■□□□□ 0.26
BRCC3-201ENST00000330045 TMEM253P0C7T8 217 aa16.68■□□□□ 0.26
BRCC3-201ENST00000330045 HPDP32754 393 aaPredicted RBP16.68■□□□□ 0.26
BRCC3-201ENST00000330045 FKBP1AP62942 108 aaKnown RBP16.68■□□□□ 0.26
BRCC3-201ENST00000330045 HDLBPQ00341 1268 aaKnown RBP16.68■□□□□ 0.26
BRCC3-201ENST00000330045 NAA35Q5VZE5 725 aa16.68■□□□□ 0.26
BRCC3-201ENST00000330045 KSR1Q8IVT5 923 aa16.68■□□□□ 0.26
BRCC3-201ENST00000330045 RTKN2Q8IZC4 609 aa16.68■□□□□ 0.26
BRCC3-201ENST00000330045 RFFLQ8WZ73 363 aa16.68■□□□□ 0.26
BRCC3-201ENST00000330045 PSMD1Q99460 953 aa16.68■□□□□ 0.26
BRCC3-201ENST00000330045 WDR18Q9BV38 432 aa16.68■□□□□ 0.26
BRCC3-201ENST00000330045 NCANO14594 1321 aa16.68■□□□□ 0.26
BRCC3-201ENST00000330045 ATXN2Q99700 1313 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms