RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 MAGEB2O15479 319 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 ARL2P36404 184 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 CTCFP49711 727 aaPredicted RBP11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 SOX10P56693 466 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 MYL5Q02045 173 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 GRIK4Q16099 956 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 MYOCDQ8IZQ8 938 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 SLC17A8Q8NDX2 589 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 TRAPPC12Q8WVT3 735 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 SPIRE2Q8WWL2 714 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 NELFBQ8WX92 580 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 RWDD2AQ9UIY3 292 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 MAPK8IP1Q9UQF2 711 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 KAT6AQ92794 2004 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 HTTP42858 3142 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 SIP14410 1827 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 RRN3P2A6NIE6 340 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 KIF20AO95235 890 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 HSPA1AP0DMV8 641 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 HSPA1BP0DMV9 641 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 SMIM10L2AP0DMW4 78 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 SMIM10L2BP0DMW5 78 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 CASP5P51878 434 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 NCKAP1LP55160 1127 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 DMP1Q13316 513 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 ALCAMQ13740 583 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 LRRC41Q15345 812 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 BMT2Q1RMZ1 405 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 SLC9C1Q4G0N8 1177 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 CCSAPQ6IQ19 270 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 STXBP4Q6ZWJ1 553 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 RNF180Q86T96 592 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 LUZP1Q86V48 1076 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 PCSK9Q8NBP7 692 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 ENOX1Q8TC92 643 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 TCP11Q8WWU5 503 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 BSNDQ8WZ55 320 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 TMEM143Q96AN5 459 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 ST6GALNAC4Q9H4F1 302 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 SMTNL1A8MU46 457 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 GCNT3O95395 438 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 MYBP10242 640 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 NMT1P30419 496 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 IGBP1P78318 339 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 IER5Q5VY09 327 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 LHX8Q68G74 356 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 LINC01465Q8N7H1 131 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 RETREG2Q8NC44 543 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 ASAP3Q8TDY4 903 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 SCFD1Q8WVM8 642 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 P2RX5Q93086 422 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 IFT74Q96LB3 600 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 GRPEL1Q9HAV7 217 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 NRCAMQ92823 1304 aa11.31□□□□□ -0.6
VIPAS39-201ENST00000327028 BECN2A8MW95 431 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 K7ENM7 598 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 PPP1R37O75864 691 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 CCNE1P24864 410 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 NPTX2P47972 431 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 LBX1P52954 281 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 SMTNP53814 917 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 PEX3P56589 373 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 NCAPHQ15003 741 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 PPP2R5AQ15172 486 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 FOXR2Q6PJQ5 311 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 MTHFD1LQ6UB35 978 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 ZNF720Q7Z2F6 126 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 ZNF507Q8TCN5 953 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 LMBR1Q8WVP7 490 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 MED15Q96RN5 788 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 STRA6Q9BX79 667 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 UNC93B1Q9H1C4 597 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 KCNG1Q9UIX4 513 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 BICDL2A1A5D9 508 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 GLRA2P23416 452 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 KLRC1P26715 233 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 HOXC8P31273 242 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 NAMPTP43490 491 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 KCNA10Q16322 511 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 UVSSAQ2YD98 709 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 MARCH8Q5T0T0 291 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 L1TD1Q5T7N2 865 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 CENPPQ6IPU0 288 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 CXCL17Q6UXB2 119 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 LRRC71Q8N4P6 559 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 PSPC1Q8WXF1 523 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 KCNN1Q92952 543 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 NTPCRQ9BSD7 190 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 SUGCTQ9HAC7 445 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 PAK6Q9NQU5 681 aaPredicted RBP11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 PCDHB13Q9Y5F0 798 aa11.3□□□□□ -0.6
VIPAS39-201ENST00000327028 H0YCG3 227 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 GOLGA6L19H0YKK7 550 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 ASGR1P07306 291 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 SCP2P22307 547 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 MRE11P49959 708 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 DNM2P50570 870 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 STX17P56962 302 aa11.29□□□□□ -0.6
VIPAS39-201ENST00000327028 DRP2Q13474 957 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms