RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ADSSL1Q8N142 457 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 MLKLQ8NB16 471 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 KLHDC9Q8NEP7 349 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 FAM200AQ8TCP9 573 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 ASAP3Q8TDY4 903 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 SCFD1Q8WVM8 642 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 LMBR1Q8WVP7 490 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 SPC25Q9HBM1 224 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 ADGRA3Q8IWK6 1321 aa16.9■□□□□ 0.3
PRPF3-201ENST00000324862 FSD2A1L4K1 749 aa16.89■□□□□ 0.29
PRPF3-201ENST00000324862 GCNT3O95395 438 aa16.89■□□□□ 0.29
PRPF3-201ENST00000324862 C22orf31O95567 290 aa16.89■□□□□ 0.29
PRPF3-201ENST00000324862 HOXD13P35453 343 aa16.89■□□□□ 0.29
PRPF3-201ENST00000324862 ARID2Q68CP9 1835 aa16.89■□□□□ 0.29
PRPF3-201ENST00000324862 FAM178BQ8IXR5 827 aa16.89■□□□□ 0.29
PRPF3-201ENST00000324862 CCDC47Q96A33 483 aaKnown RBP16.89■□□□□ 0.29
PRPF3-201ENST00000324862 DEFB118Q96PH6 123 aa16.89■□□□□ 0.29
PRPF3-201ENST00000324862 HDAC6Q9UBN7 1215 aa16.89■□□□□ 0.29
PRPF3-201ENST00000324862 USP20Q9Y2K6 914 aa16.89■□□□□ 0.29
PRPF3-201ENST00000324862 HAS3O00219 553 aa16.89■□□□□ 0.29
PRPF3-201ENST00000324862 SLC16A4O15374 487 aa16.89■□□□□ 0.29
PRPF3-201ENST00000324862 L1TD1Q5T7N2 865 aaKnown RBP16.89■□□□□ 0.29
PRPF3-201ENST00000324862 EFCAB12Q6NXP0 572 aa16.89■□□□□ 0.29
PRPF3-201ENST00000324862 GOLGA6L3A6NEY3 463 aa16.88■□□□□ 0.29
PRPF3-201ENST00000324862 CCDC169A6NNP5 214 aa16.88■□□□□ 0.29
PRPF3-201ENST00000324862 PLS3P13797 630 aa16.88■□□□□ 0.29
PRPF3-201ENST00000324862 GLRA2P23416 452 aa16.88■□□□□ 0.29
PRPF3-201ENST00000324862 NPTX2P47972 431 aa16.88■□□□□ 0.29
PRPF3-201ENST00000324862 NCAPHQ15003 741 aa16.88■□□□□ 0.29
PRPF3-201ENST00000324862 CTU1Q7Z7A3 348 aaKnown RBP16.88■□□□□ 0.29
PRPF3-201ENST00000324862 MCPH1Q8NEM0 835 aa16.88■□□□□ 0.29
PRPF3-201ENST00000324862 PRPF31Q8WWY3 499 aaKnown RBP16.88■□□□□ 0.29
PRPF3-201ENST00000324862 NELFBQ8WX92 580 aa16.88■□□□□ 0.29
PRPF3-201ENST00000324862 RNF208Q9H0X6 261 aa16.88■□□□□ 0.29
PRPF3-201ENST00000324862 SEMA6BQ9H3T3 888 aa16.88■□□□□ 0.29
PRPF3-201ENST00000324862 ZNF720Q7Z2F6 126 aa16.88■□□□□ 0.29
PRPF3-201ENST00000324862 DRC1Q96MC2 740 aa16.88■□□□□ 0.29
PRPF3-201ENST00000324862 GRIN2DO15399 1336 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 IGKV6-21A0A0C4DH24 114 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 K7ENM7 598 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 CCL5P13501 91 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 ARL2P36404 184 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 RFC5P40937 340 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 CTCFP49711 727 aaPredicted RBP16.87■□□□□ 0.29
PRPF3-201ENST00000324862 NBPF20Q3BBV1 942 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 ZNF484Q5JVG2 852 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 MTHFD1LQ6UB35 978 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 OLFML3Q9NRN5 406 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 LARSQ9P2J5 1176 aaKnown RBP16.87■□□□□ 0.29
PRPF3-201ENST00000324862 TREHO43280 583 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 TMEM62Q0P6H9 643 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 PSMD2Q13200 908 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 MTG1Q9BT17 334 aaPredicted RBP16.87■□□□□ 0.29
PRPF3-201ENST00000324862 HSD3B7Q9H2F3 369 aa16.87■□□□□ 0.29
PRPF3-201ENST00000324862 TISP43B9A030 160 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 VTNP04004 478 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 GAP43P17677 238 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 NKX3-2P78367 333 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 PAK1Q13153 545 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 RUFY4Q6ZNE9 571 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 EPM2AIP1Q7L775 607 aaPredicted RBP16.86■□□□□ 0.29
PRPF3-201ENST00000324862 RNF180Q86T96 592 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 RHPN2Q8IUC4 686 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 MYOCDQ8IZQ8 938 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 KIFAP3Q92845 792 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 PAK6Q9NQU5 681 aaPredicted RBP16.86■□□□□ 0.29
PRPF3-201ENST00000324862 CSDE1O75534 798 aaKnown RBP16.86■□□□□ 0.29
PRPF3-201ENST00000324862 SRGAP2CP0DJJ0 459 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 ACLYP53396 1101 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 DMP1Q13316 513 aaPredicted RBP16.86■□□□□ 0.29
PRPF3-201ENST00000324862 CAPSQ13938 189 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 FAM47CQ5HY64 1035 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 ANKRD40Q6AI12 368 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 NFRKBQ6P4R8 1299 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 C7orf31Q8N865 590 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 NAT10Q9H0A0 1025 aaKnown RBP16.86■□□□□ 0.29
PRPF3-201ENST00000324862 FAM49AQ9H0Q0 323 aaPredicted RBP16.86■□□□□ 0.29
PRPF3-201ENST00000324862 GRPEL1Q9HAV7 217 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 SAMSN1Q9NSI8 373 aaKnown RBP16.86■□□□□ 0.29
PRPF3-201ENST00000324862 FANCLQ9NW38 375 aa16.86■□□□□ 0.29
PRPF3-201ENST00000324862 SUCLA2Q9P2R7 463 aaPredicted RBP16.86■□□□□ 0.29
PRPF3-201ENST00000324862 LRRIQ4A6NIV6 560 aa16.85■□□□□ 0.29
PRPF3-201ENST00000324862 AP5Z1O43299 807 aa16.85■□□□□ 0.29
PRPF3-201ENST00000324862 CST5P28325 142 aaPredicted RBP16.85■□□□□ 0.29
PRPF3-201ENST00000324862 HAUS6Q7Z4H7 955 aa16.85■□□□□ 0.29
PRPF3-201ENST00000324862 TMEM161BQ8NDZ6 487 aa16.85■□□□□ 0.29
PRPF3-201ENST00000324862 VTI1AQ96AJ9 217 aa16.85■□□□□ 0.29
PRPF3-201ENST00000324862 KMT5AQ9NQR1 393 aa16.85■□□□□ 0.29
PRPF3-201ENST00000324862 BECN2A8MW95 431 aa16.85■□□□□ 0.29
PRPF3-201ENST00000324862 LAMTOR4Q0VGL1 99 aa16.85■□□□□ 0.29
PRPF3-201ENST00000324862 GUF1Q8N442 669 aaKnown RBP16.85■□□□□ 0.29
PRPF3-201ENST00000324862 LINC01465Q8N7H1 131 aa16.85■□□□□ 0.29
PRPF3-201ENST00000324862 NLRP4Q96MN2 994 aa16.85■□□□□ 0.29
PRPF3-201ENST00000324862 TIPINQ9BVW5 301 aa16.85■□□□□ 0.29
PRPF3-201ENST00000324862 NFE2L3Q9Y4A8 694 aa16.85■□□□□ 0.29
PRPF3-201ENST00000324862 NRCAMQ92823 1304 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 LOXHD1Q8IVV2 1947 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 MSCO60682 206 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 PPP1R37O75864 691 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 ATP1A3P13637 1013 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms