RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 POC1B-GALNT4F8VUJ3 575 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 SHOX2O60902 331 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 LUC7L3O95232 432 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 SMC6Q96SB8 1091 aa13.74□□□□□ -0.21
DNMT3A-202ENST00000321117 FSBPO95073 299 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 AGTP01019 485 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 TROVE2P10155 538 aaKnown RBP eCLIP13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 STRN3Q13033 797 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 ZNF746Q6NUN9 644 aaPredicted RBP13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 PPP1R21Q6ZMI0 780 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 SMIM5Q71RC9 77 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 KIAA0825Q8IV33 1275 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 SPICE1Q8N0Z3 855 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 VPS52Q8N1B4 723 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 LRRC8CQ8TDW0 803 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 NT5C1BQ96P26 610 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 SLC4A9Q96Q91 983 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 INTS2Q9H0H0 1204 aaKnown RBP13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.73□□□□□ -0.213e-6■■□□□ 14.1
DNMT3A-202ENST00000321117 CCT8L1PA6NM43 557 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 RPS6KA4O75676 772 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 FGFR4P22455 802 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 EVX2Q03828 476 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 NPY5RQ15761 445 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 ABCB5Q2M3G0 1257 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 ZNF571Q7Z3V5 609 aaPredicted RBP13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 TCHPQ9BT92 498 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 AGTPBP1Q9UPW5 1226 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 RGPD2P0DJD1 1756 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 CYP11B2P19099 503 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 SP4Q02446 784 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 JAMLQ86YT9 394 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 CNPY4Q8N129 248 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 BAP1Q92560 729 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 PRMT1Q99873 361 aaKnown RBP13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 WDR11Q9BZH6 1224 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 PITPNM2Q9BZ72 1349 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 MYBP10242 640 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 DLATP10515 647 aaKnown RBP13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 PPP4CP60510 307 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 SARNPP82979 210 aaKnown RBP13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 TMED2Q15363 201 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 SH3GL2Q99962 352 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 ZNF577Q9BSK1 485 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 STK33Q9BYT3 514 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 TTYH3Q9C0H2 523 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 AIPL1Q9NZN9 384 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 ZNF148Q9UQR1 794 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 CEP83Q9Y592 693 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 PCDHGC5Q9Y5F6 944 aa13.73□□□□□ -0.21
DNMT3A-202ENST00000321117 SLC16A3O15427 465 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 PPP2R5AQ15172 486 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 MUM1Q2TAK8 710 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 ANKRD20A3Q5VUR7 823 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 DCUN1D2Q6PH85 259 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 NSMFQ6X4W1 530 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 DNAAF5Q86Y56 855 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 PURBQ96QR8 312 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 NUDT12Q9BQG2 462 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 TRIM6Q9C030 488 aaPredicted RBP13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 C1orf112Q9NSG2 853 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 TXLNGQ9NUQ3 528 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 KCNQ2O43526 872 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 NSFP46459 744 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 TBC1D10BQ4KMP7 808 aaPredicted RBP13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 CCDC62Q6P9F0 684 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 IQCKQ8N0W5 287 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 GLG1Q92896 1179 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 JMJD4Q9H9V9 463 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 DDX20Q9UHI6 824 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 INTUQ9ULD6 942 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 BBOX1O75936 387 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 CPP00450 1065 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 BMP3P12645 472 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 BRAFP15056 766 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 ATF7P17544 494 aaPredicted RBP13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 PON1P27169 355 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 COPB2P35606 906 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 ZNF844Q08AG5 666 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 TAF11Q15544 211 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 SYDE2Q5VT97 1194 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 GJB7Q6PEY0 223 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 RPUSD2Q8IZ73 545 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 MREGQ8N565 214 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 CHURC1Q8WUH1 139 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 SCFD1Q8WVM8 642 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 ACCSQ96QU6 501 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 TMEM206Q9H813 350 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 PRM3Q9NNZ6 103 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 GGT7Q9UJ14 662 aa13.72□□□□□ -0.21
DNMT3A-202ENST00000321117 CRYBG1Q9Y4K1 1723 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 KIF1CO43896 1103 aaKnown RBP13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 TMEM253P0C7T8 217 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 ITGA4P13612 1032 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 SCTRP47872 440 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 FAM102BQ5T8I3 360 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 LRRC55Q6ZSA7 311 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 TXNRD3Q86VQ6 643 aa13.71□□□□□ -0.21
DNMT3A-202ENST00000321117 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms