RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 LONRF1Q17RB8 773 aa10.46□□□□□ -0.74
PTPRA-202ENST00000318266 THEMIS2Q5TEJ8 643 aa10.46□□□□□ -0.74
PTPRA-202ENST00000318266 C12orf60Q5U649 245 aa10.46□□□□□ -0.74
PTPRA-202ENST00000318266 JAMLQ86YT9 394 aa10.46□□□□□ -0.74
PTPRA-202ENST00000318266 SLC35G2Q8TBE7 412 aa10.46□□□□□ -0.74
PTPRA-202ENST00000318266 IKZF4Q9H2S9 585 aa10.46□□□□□ -0.74
PTPRA-202ENST00000318266 ARMCX3Q9UH62 379 aaPredicted RBP10.46□□□□□ -0.74
PTPRA-202ENST00000318266 CLIC2O15247 247 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 ACSL3O95573 720 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 ZBTB48P10074 688 aaPredicted RBP10.45□□□□□ -0.74
PTPRA-202ENST00000318266 PON1P27169 355 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 IL6STP40189 918 aaPredicted RBP10.45□□□□□ -0.74
PTPRA-202ENST00000318266 RNASELQ05823 741 aaKnown RBP10.45□□□□□ -0.74
PTPRA-202ENST00000318266 SMIM5Q71RC9 77 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 SLC51AQ86UW1 340 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 SPDYE1Q8NFV5 336 aaPredicted RBP10.45□□□□□ -0.74
PTPRA-202ENST00000318266 SAAL1Q96ER3 474 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 NSRP1Q9H0G5 558 aaKnown RBP10.45□□□□□ -0.74
PTPRA-202ENST00000318266 BCAS3Q9H6U6 928 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 ZDHHC18Q9NUE0 388 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 SPATS2LQ9NUQ6 558 aaKnown RBP10.45□□□□□ -0.74
PTPRA-202ENST00000318266 SUCLA2Q9P2R7 463 aaPredicted RBP10.45□□□□□ -0.74
PTPRA-202ENST00000318266 PCDHB13Q9Y5F0 798 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 COL4A1P02462 1669 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 MEIS1O00470 390 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 CES2O00748 559 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 SNX3O60493 162 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 GSTA1P08263 222 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 GRIK3Q13003 919 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 PSMD2Q13200 908 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 CRELD2Q6UXH1 353 aaPredicted RBP10.45□□□□□ -0.74
PTPRA-202ENST00000318266 SEPT14Q6ZU15 432 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 VPS36Q86VN1 386 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 TXNRD3Q86VQ6 643 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 CLEC10AQ8IUN9 316 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 RNF217Q8TC41 542 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 LBHD1Q9BQE6 289 aaPredicted RBP10.45□□□□□ -0.74
PTPRA-202ENST00000318266 GCNT4Q9P109 453 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 SRCAPQ6ZRS2 3230 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 GOLGA6L10A0A0M3HER8 536 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 CFAP73A6NFT4 308 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 USP17L5A8MUK1 530 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 RASGRF2O14827 1237 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 AP1G2O75843 785 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 XRCC5P13010 732 aaKnown RBP10.45□□□□□ -0.74
PTPRA-202ENST00000318266 STAT3P40763 770 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 CASP4P49662 377 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 POU5F1Q01860 360 aaKnown RBP10.45□□□□□ -0.74
PTPRA-202ENST00000318266 KLRC3Q07444 240 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 ZNF268Q14587 947 aaPredicted RBP10.45□□□□□ -0.74
PTPRA-202ENST00000318266 SLC15A2Q16348 729 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 ERFEQ4G0M1 354 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 KIAA1755Q5JYT7 1200 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 ANKRD20A2Q5SQ80 823 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 ANKRD20A1Q5TYW2 823 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 ANKRD20A3Q5VUR7 823 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 CCDC65Q8IXS2 484 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 RASGEF1CQ8N431 466 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 ALG3Q92685 438 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 CENPTQ96BT3 561 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 CEP63Q96MT8 703 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 CTNNAL1Q9UBT7 734 aa10.45□□□□□ -0.74
PTPRA-202ENST00000318266 LY75O60449 1722 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 RPTORQ8N122 1335 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 MPHOSPH10O00566 681 aaKnown RBP10.44□□□□□ -0.74
PTPRA-202ENST00000318266 NTSR2O95665 410 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 GH1P01241 217 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 AFPP02771 609 aaKnown RBP10.44□□□□□ -0.74
PTPRA-202ENST00000318266 PDHA1P08559 390 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 RPL21P46778 160 aaKnown RBP10.44□□□□□ -0.74
PTPRA-202ENST00000318266 MARCKSL1P49006 195 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 FXR2P51116 673 aaKnown RBP eCLIP10.44□□□□□ -0.741e-6■■■□□ 16.4
PTPRA-202ENST00000318266 PDE6CP51160 858 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 PTENP60484 403 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 UBE4AQ14139 1066 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 TNIP1Q15025 636 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 TAF11Q15544 211 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 CNGA2Q16280 664 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 SLC27A3Q5K4L6 730 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 DUPD1Q68J44 220 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 ZDHHC24Q6UX98 284 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 SYCE1Q8N0S2 351 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 HES6Q96HZ4 224 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 GPCPD1Q9NPB8 672 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 SLC5A4Q9NY91 659 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 STXBP5LQ9Y2K9 1186 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 USP15Q9Y4E8 981 aaPredicted RBP10.44□□□□□ -0.74
PTPRA-202ENST00000318266 CACNA1SQ13698 1873 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 EDIL3O43854 480 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 RAD21O60216 631 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 GNA14O95837 355 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 PLA2G4BP0C869 781 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 CALRP27797 417 aaKnown RBP10.44□□□□□ -0.74
PTPRA-202ENST00000318266 HIBADHP31937 336 aaKnown RBP10.44□□□□□ -0.74
PTPRA-202ENST00000318266 MSH2P43246 934 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 KCNJ1P48048 391 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 COPS2P61201 443 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 GNPTABQ3T906 1256 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 SBK1Q52WX2 424 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 MIS18BP1Q6P0N0 1132 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms