RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 SLC9C2Q5TAH2 1124 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 USPL1Q5W0Q7 1092 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TTC39CQ8N584 583 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 PGBD1Q96JS3 809 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TTC1Q99614 292 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 YIPF3Q9GZM5 350 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TAB2Q9NYJ8 693 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 KLHL33A6NCF5 533 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 ADCY3O60266 1144 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 KLHL2O95198 593 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 KRT75O95678 551 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 ADCY8P40145 1251 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 RANBP1P43487 201 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 BNC1Q01954 994 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 SNX1Q13596 522 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TUBA3CQ13748 450 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 CNGA3Q16281 694 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 KCTD16Q68DU8 428 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 CDAN1Q8IWY9 1227 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TRIML2Q8N7C3 387 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 PAWRQ96IZ0 340 aaKnown RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 DCAF5Q96JK2 942 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 PPP1R2P1Q96PQ5 205 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 NLRP2Q9NX02 1062 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 MPP6Q9NZW5 540 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 ATXN10Q9UBB4 475 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 NFU1Q9UMS0 254 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 DNAH14Q0VDD8 3507 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 GOLGA8JA6NMD2 632 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 GIPC1O14908 333 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 SLC16A3O15427 465 aaKnown RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 AP5Z1O43299 807 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 HAUS5O94927 633 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 RAD23BP54727 409 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 SNRPFP62306 86 aaKnown RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 CMPK2Q5EBM0 449 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 LRRC31Q6UY01 552 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 EPM2AIP1Q7L775 607 aaPredicted RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 PPP2R3CQ969Q6 453 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 RILPQ96NA2 401 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 PHF3Q92576 2039 aaKnown RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 SOWAHDA6NJG2 315 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 PDLIM1O00151 329 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 ORC4O43929 436 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 IMPDH2P12268 514 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 SLC1A1P43005 524 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TIMM10P62072 90 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 SF3A3Q12874 501 aaKnown RBP eCLIP4.82□□□□□ -1.643e-7■■■■■ 36.3
CNOT1-201ENST00000317147 E2F5Q15329 346 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 CALCRLQ16602 461 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 PARP6Q2NL67 630 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 OTUD7BQ6GQQ9 843 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 PRUNE1Q86TP1 453 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 AENQ8WTP8 325 aaKnown RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 GCOM2Q9BZD3 368 aaPredicted RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 ECT2Q9H8V3 914 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 KCND2Q9NZV8 630 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TBC1D7Q9P0N9 293 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TRAF3IP3Q9Y228 551 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 APOBEC2Q9Y235 224 aaKnown RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 KIF13BQ9NQT8 1826 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 MINDY4BA8MYZ0 360 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 PFDN6O15212 129 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 KDM1AO60341 852 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 INHBAP08476 426 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 OR52Z1P0C646 297 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TSPY3P0CV98 308 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TSPY8P0CW00 308 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 MYL4P12829 197 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 NQO1P15559 274 aaKnown RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 VCAM1P19320 739 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 VSNL1P62760 191 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TAP1Q03518 808 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 ALX1Q15699 326 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TRIM72Q6ZMU5 477 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 ENOSF1Q7L5Y1 443 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TRMT44Q8IYL2 757 aaKnown RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 MINDY2Q8NBR6 621 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TEKT4Q8WW24 435 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 SNF8Q96H20 258 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 MAGEB18Q96M61 343 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 ERGIC2Q96RQ1 377 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 WDR24Q96S15 920 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 STN1Q9H668 368 aaKnown RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 SYBUQ9NX95 663 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 A0A0A6YYK5 440 aaPredicted RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 KANSL1LA0AUZ9 987 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 FAM25AB3EWG3 89 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 FAM25CB3EWG5 89 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 FAM25GB3EWG6 89 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 NPTXRO95502 500 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 EEF1DP29692 281 aaKnown RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 MAN1B1Q9UKM7 699 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 DENND2AQ9ULE3 1009 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 ZMYND8Q9ULU4 1186 aaPredicted RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 SAMM50Q9Y512 469 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 ACEP12821 1306 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 GOLGA8IPA6NC78 632 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 SERPINI2O75830 405 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 HSPA1AP0DMV8 641 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms