RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 POTEB3A0JP26 581 aa18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 POTECB2RU33 542 aa18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 WDR46O15213 610 aaKnown RBP18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 FOSP01100 380 aaPredicted RBP18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 PSEN1P49768 467 aa18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 TNNC1P63316 161 aa18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 NEDD9Q14511 834 aa18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 COBLL1Q53SF7 1204 aa18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 POTEBQ6S5H4 581 aa18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 LARP4BQ92615 738 aaKnown RBP18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 TAF1DQ9H5J8 278 aaPredicted RBP18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 DONSONQ9NYP3 566 aa18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 COL20A1Q9P218 1284 aa18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 SUFUQ9UMX1 484 aa18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 CEP83Q9Y592 693 aa18.71■□□□□ 0.59
SCAMP4-201ENST00000316097 RBAK-RBAKDNI3L0D1 243 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 PIK3CDO00329 1044 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 MEIS1O00470 390 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 FGFR1OPO95684 399 aaKnown RBP18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 CHRM1P11229 460 aaPredicted RBP18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 HSD17B3P37058 310 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 KCNMA1Q12791 1236 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 NAB2Q15742 525 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 SPRED3Q2MJR0 410 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 MEI1Q5TIA1 1274 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 SV2BQ7L1I2 683 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 RPAINQ86UA6 219 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 WDR18Q9BV38 432 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 PLCB1Q9NQ66 1216 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 BCCIPQ9P287 314 aaKnown RBP eCLIP18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 ZNF112Q9UJU3 913 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 MRPL11Q9Y3B7 192 aaKnown RBP18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 GOLGA6L7A0A1B0GV03 622 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 GMNCA6NCL1 334 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 TLR2O60603 784 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 MED24O75448 989 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 BACE1P56817 501 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 ERVK-9P63128 1117 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 CACNB1Q02641 598 aaPredicted RBP18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 ENOX2Q16206 610 aaKnown RBP18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 PREPLQ4J6C6 727 aaPredicted RBP18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 USP38Q8NB14 1042 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 ZNF280CQ8ND82 737 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 MBOAT7Q96N66 472 aa18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 DDX20Q9UHI6 824 aaKnown RBP18.7■□□□□ 0.58
SCAMP4-201ENST00000316097 ATAD5Q96QE3 1844 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 SRRM3A6NNA2 597 aaPredicted RBP18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 BACH1O14867 736 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 PEX10O60683 326 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 PLA2G6O60733 806 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 ICAM1P05362 532 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 TMOD1P28289 359 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 ARID5AQ03989 594 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 DRP2Q13474 957 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 QPCTQ16769 361 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 SFMBT2Q5VUG0 894 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 LPAR1Q92633 364 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 ATG4CQ96DT6 458 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 LUC7LQ9NQ29 371 aaKnown RBP18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 MCM8Q9UJA3 840 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 SSC5DA1L4H1 1573 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 NPHP3-ACAD11A0A0J9YXS1 232 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 PSMC6P62333 389 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 CYP4A11Q02928 519 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 SPIRE1Q08AE8 756 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 LRRC55Q6ZSA7 311 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 RAD54LQ92698 747 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 PACSIN1Q9BY11 444 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 OSBPL7Q9BZF2 842 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 ACTR5Q9H9F9 607 aaPredicted RBP18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 PKD2L1Q9P0L9 805 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 RIPK3Q9Y572 518 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 POLR2AP24928 1970 aaKnown RBP18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 ABCB11O95342 1321 aa18.69■□□□□ 0.58
SCAMP4-201ENST00000316097 POTEFA5A3E0 1075 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 CHMP2AO43633 222 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 SERPING1P05155 500 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 POTEIP0CG38 1075 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 LRRC41Q15345 812 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 KCTD19Q17RG1 926 aaPredicted RBP18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 KIAA0753Q2KHM9 967 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 POTEGQ6S5H5 508 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 POTEEQ6S8J3 1075 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 LRIG3Q6UXM1 1119 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 UNC13DQ70J99 1090 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 DDX42Q86XP3 938 aaKnown RBP eCLIP18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 CLEC4DQ8WXI8 215 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 ISCUQ9H1K1 167 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 PCDHGC5Q9Y5F6 944 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 IGLV3-22A0A075B6J6 115 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 USP2O75604 605 aaPredicted RBP18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 CTNNA1P35221 906 aaKnown RBP18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 UAP1Q16222 522 aaPredicted RBP18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 Q4G0T1 1027 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 ODF2Q5BJF6 829 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 MOB2Q70IA6 237 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 CEP57Q86XR8 500 aa18.68■□□□□ 0.58
SCAMP4-201ENST00000316097 GUF1Q8N442 669 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms