RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 CERKLQ49MI3 558 aaPredicted RBP16.17■□□□□ 0.18
TFE3-201ENST00000315869 SLFN12Q8IYM2 578 aa16.17■□□□□ 0.18
TFE3-201ENST00000315869 GOLGA6L10A0A0M3HER8 536 aa16.17■□□□□ 0.18
TFE3-201ENST00000315869 BUB1BO60566 1050 aaPredicted RBP16.17■□□□□ 0.18
TFE3-201ENST00000315869 CFBP00751 764 aa16.17■□□□□ 0.18
TFE3-201ENST00000315869 ZNF844Q08AG5 666 aa16.17■□□□□ 0.18
TFE3-201ENST00000315869 STRIP1Q5VSL9 837 aa16.17■□□□□ 0.18
TFE3-201ENST00000315869 CSRNP1Q96S65 589 aa16.17■□□□□ 0.18
TFE3-201ENST00000315869 RUSC1Q9BVN2 902 aa16.17■□□□□ 0.18
TFE3-201ENST00000315869 CTTNBP2NLQ9P2B4 639 aa16.17■□□□□ 0.18
TFE3-201ENST00000315869 HGSO14964 777 aaPredicted RBP16.16■□□□□ 0.18
TFE3-201ENST00000315869 FAM107AO95990 144 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 IFNAR2P48551 515 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 RRP1BQ14684 758 aaKnown RBP16.16■□□□□ 0.18
TFE3-201ENST00000315869 DRAP1Q14919 205 aaPredicted RBP16.16■□□□□ 0.18
TFE3-201ENST00000315869 EDRF1Q3B7T1 1238 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 STYK1Q6J9G0 422 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 HS2ST1Q7LGA3 356 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 SYCE1Q8N0S2 351 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 FMO2Q99518 471 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 DNAJC12Q9UKB3 198 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 DDX3XO00571 662 aaKnown RBP eCLIP16.16■□□□□ 0.186e-15■■■■■ 33.6
TFE3-201ENST00000315869 ZBTB39O15060 712 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 GH2P01242 217 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 FRMD5Q7Z6J6 570 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 CACNA2D3Q8IZS8 1091 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 C7orf43Q8WVR3 580 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 CD248Q9HCU0 757 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 PLCB1Q9NQ66 1216 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 NR2E1Q9Y466 385 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 MYH1P12882 1939 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 DDX39AO00148 427 aaKnown RBP16.16■□□□□ 0.18
TFE3-201ENST00000315869 CTNND1O60716 968 aaKnown RBP16.16■□□□□ 0.18
TFE3-201ENST00000315869 PPP2R2AP63151 447 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 MTMR3Q13615 1198 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 UAP1Q16222 522 aaPredicted RBP16.16■□□□□ 0.18
TFE3-201ENST00000315869 ZNF746Q6NUN9 644 aaPredicted RBP16.16■□□□□ 0.18
TFE3-201ENST00000315869 SLC35G2Q8TBE7 412 aa16.16■□□□□ 0.18
TFE3-201ENST00000315869 NAV1Q8NEY1 1877 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 SLC12A3P55017 1021 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 HHIPL2Q6UWX4 724 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 METTL14Q9HCE5 456 aaKnown RBP16.15■□□□□ 0.18
TFE3-201ENST00000315869 EXOC3O60645 756 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 COG2Q14746 738 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 C10orf76Q5T2E6 689 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 KCNV1Q6PIU1 500 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 FBXO11Q86XK2 927 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 ZDHHC15Q96MV8 337 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 PNMA2Q9UL42 364 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 DAAM1Q9Y4D1 1078 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 DDX60LQ5H9U9 1706 aaKnown RBP16.15■□□□□ 0.18
TFE3-201ENST00000315869 FERP16591 822 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 NAP1L4Q99733 375 aaKnown RBP16.15■□□□□ 0.18
TFE3-201ENST00000315869 PCIF1Q9H4Z3 704 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 TYW1Q9NV66 732 aaKnown RBP16.15■□□□□ 0.18
TFE3-201ENST00000315869 PTPN22Q9Y2R2 807 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 PCDHA2Q9Y5H9 948 aa16.15■□□□□ 0.18
TFE3-201ENST00000315869 CCDC188H7C350 402 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 CPP00450 1065 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 VIMP08670 466 aaKnown RBP16.14■□□□□ 0.17
TFE3-201ENST00000315869 QPCTQ16769 361 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 AADACL2Q6P093 401 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 MREGQ8N565 214 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 SCFD2Q8WU76 684 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 SLC35C1Q96A29 364 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 TMEM39BQ9GZU3 492 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 PPP1R9AQ9ULJ8 1098 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 FRMD4BQ9Y2L6 1034 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 ECE1P42892 770 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 DR1Q01658 176 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 ICA1Q05084 483 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 E2F5Q15329 346 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 PPP1R18Q6NYC8 613 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 CCDC91Q7Z6B0 441 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 SPATS2Q86XZ4 545 aaKnown RBP16.14■□□□□ 0.17
TFE3-201ENST00000315869 CCDC13Q8IYE1 715 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 DYDC1Q8WWB3 177 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 AMNQ9BXJ7 453 aa16.14■□□□□ 0.17
TFE3-201ENST00000315869 CNOT8Q9UFF9 292 aaKnown RBP16.14■□□□□ 0.17
TFE3-201ENST00000315869 PDXKO00764 312 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 GKAP1Q5VSY0 366 aaPredicted RBP16.13■□□□□ 0.17
TFE3-201ENST00000315869 FAM178BQ8IXR5 827 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 MGARPQ8TDB4 240 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 ACTRT1Q8TDG2 376 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 ZBTB21Q9ULJ3 1066 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 FZD1Q9UP38 647 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 LOC102724159A0A0B4J2E5 919 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 FAM86B1E9PN63 330 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 EGFRP00533 1210 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 FAM86B2P0C5J1 330 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 MESDQ14696 234 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 PWP2Q15269 919 aaKnown RBP16.13■□□□□ 0.17
TFE3-201ENST00000315869 EPHA7Q15375 998 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 RAPGEF5Q92565 580 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 EIF2AK1Q9BQI3 630 aaKnown RBP16.13■□□□□ 0.17
TFE3-201ENST00000315869 PSMC2P35998 433 aaKnown RBP16.13■□□□□ 0.17
TFE3-201ENST00000315869 MAP2K2P36507 400 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 R3HDM1Q15032 1099 aaKnown RBP16.13■□□□□ 0.17
TFE3-201ENST00000315869 ODR4Q5SWX8 454 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms