RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 TRAF7Q6Q0C0 670 aa8.77□□□□□ -1
CDC42-201ENST00000315554 MAEAQ7L5Y9 396 aa8.77□□□□□ -1
CDC42-201ENST00000315554 KCNK18Q7Z418 384 aa8.77□□□□□ -1
CDC42-201ENST00000315554 CABP7Q86V35 215 aa8.77□□□□□ -1
CDC42-201ENST00000315554 KIAA0319LQ8IZA0 1049 aa8.77□□□□□ -1
CDC42-201ENST00000315554 TMEM199Q8N511 208 aa8.77□□□□□ -1
CDC42-201ENST00000315554 CAGE1Q8TC20 777 aa8.77□□□□□ -1
CDC42-201ENST00000315554 EPSTI1Q96J88 318 aa8.77□□□□□ -1
CDC42-201ENST00000315554 CCDC43Q96MW1 224 aaKnown RBP8.77□□□□□ -1
CDC42-201ENST00000315554 PNMA5Q96PV4 448 aa8.77□□□□□ -1
CDC42-201ENST00000315554 POLD4Q9HCU8 107 aa8.77□□□□□ -1
CDC42-201ENST00000315554 STK24Q9Y6E0 443 aa8.77□□□□□ -1
CDC42-201ENST00000315554 MYH9P35579 1960 aaKnown RBP8.77□□□□□ -1.01
CDC42-201ENST00000315554 MYH15Q9Y2K3 1946 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 WDR81Q562E7 1941 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 NBNO60934 754 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 LYPLA2O95372 231 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 CHRNA1P02708 482 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 POLGP54098 1239 aaPredicted RBP8.77□□□□□ -1.01
CDC42-201ENST00000315554 MRPS6P82932 125 aaKnown RBP8.77□□□□□ -1.01
CDC42-201ENST00000315554 GRB10Q13322 594 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 GPNMBQ14956 572 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 TCTN1Q2MV58 587 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 C9orf50Q5SZB4 431 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 TAF2Q6P1X5 1199 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 C16orf59Q7L2K0 433 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 OTUD6AQ7L8S5 288 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 KRI1Q8N9T8 703 aaKnown RBP8.77□□□□□ -1.01
CDC42-201ENST00000315554 RASSF8Q8NHQ8 419 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 SYMPKQ92797 1274 aaKnown RBP8.77□□□□□ -1.01
CDC42-201ENST00000315554 TMEM143Q96AN5 459 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 VWCEQ96DN2 955 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 CDK5RAP3Q96JB5 506 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 NACC1Q96RE7 527 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 GDF15Q99988 308 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 PANK2Q9BZ23 570 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 UBE2OQ9C0C9 1292 aaKnown RBP8.77□□□□□ -1.01
CDC42-201ENST00000315554 CDHR5Q9HBB8 845 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 GDPD2Q9HCC8 539 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 AKT3Q9Y243 479 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 SRPRBQ9Y5M8 271 aaKnown RBP8.77□□□□□ -1.01
CDC42-201ENST00000315554 CDY2AQ9Y6F7 541 aa8.77□□□□□ -1.01
CDC42-201ENST00000315554 SMIM35A0A1B0GVV1 85 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 ARHGEF35A5YM69 484 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 MAGEB2O15479 319 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 GTPBP6O43824 516 aaPredicted RBP8.76□□□□□ -1.01
CDC42-201ENST00000315554 MAFO75444 373 aaPredicted RBP8.76□□□□□ -1.01
CDC42-201ENST00000315554 YEATS4O95619 227 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 SSBP05455 408 aaKnown RBP eCLIP8.76□□□□□ -1.01
CDC42-201ENST00000315554 GHRP10912 638 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 LONP1P36776 959 aaKnown RBP8.76□□□□□ -1.01
CDC42-201ENST00000315554 UBA7P41226 1012 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 ME1P48163 572 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 RARRES1P49788 294 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 NUCB2P80303 420 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 MGAT3Q09327 533 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 PPIGQ13427 754 aaKnown RBP eCLIP8.76□□□□□ -1.01
CDC42-201ENST00000315554 DHX8Q14562 1220 aaKnown RBP8.76□□□□□ -1.01
CDC42-201ENST00000315554 EMC2Q15006 297 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 KIZQ2M2Z5 673 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 PRPF38BQ5VTL8 546 aaKnown RBP8.76□□□□□ -1.01
CDC42-201ENST00000315554 ZNF365Q70YC5 407 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 RSPH3Q86UC2 560 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 KSR1Q8IVT5 923 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 LINC01465Q8N7H1 131 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 LRRC15Q8TF66 581 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 SCLT1Q96NL6 688 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 MAP7D2Q96T17 732 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.76□□□□□ -1.012e-8■■■□□ 15.4
CDC42-201ENST00000315554 ZBED2Q9BTP6 218 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 BHMT2Q9H2M3 363 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 IL23AQ9NPF7 189 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 GPRC5CQ9NQ84 441 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 XPNPEP1Q9NQW7 623 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 ANKEF1Q9NU02 776 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 SUCLA2Q9P2R7 463 aaPredicted RBP8.76□□□□□ -1.01
CDC42-201ENST00000315554 PCDHA7Q9UN72 937 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 TRPV2Q9Y5S1 764 aa8.76□□□□□ -1.01
CDC42-201ENST00000315554 SCN5AQ14524 2016 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 KAT6AQ92794 2004 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 IGKV6-21A0A0C4DH24 114 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 M0QZ92 97 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 CSDE1O75534 798 aaKnown RBP8.75□□□□□ -1.01
CDC42-201ENST00000315554 PLCG1P19174 1290 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 TMOD1P28289 359 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 RFC5P40937 340 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 NLRP11P59045 1033 aaKnown RBP8.75□□□□□ -1.01
CDC42-201ENST00000315554 KRT85P78386 507 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 RBL2Q08999 1139 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 RAD51AP2Q09MP3 1159 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 SHHQ15465 462 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 TMEM119Q4V9L6 283 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 PADI6Q6TGC4 694 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 OTOP2Q7RTS6 562 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 RHPN2Q8IUC4 686 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 PDILTQ8N807 584 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 LEO1Q8WVC0 666 aaPredicted RBP8.75□□□□□ -1.01
CDC42-201ENST00000315554 TMEM40Q8WWA1 233 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 SLC7A3Q8WY07 619 aa8.75□□□□□ -1.01
CDC42-201ENST00000315554 CALML4Q96GE6 196 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms