RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 KITP10721 976 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 CARSP49589 748 aaKnown RBP13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 HDAC4P56524 1084 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 KRT77Q7Z794 578 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 NEK9Q8TD19 979 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 TTC17Q96AE7 1141 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 DYDC2Q96IM9 177 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 NHEJ1Q9H9Q4 299 aaPredicted RBP13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 PIK3C2GO75747 1445 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 FGAP02671 866 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 SLFN14P0C7P3 912 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 PMS1P54277 932 aaKnown RBP13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 COPS2P61201 443 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 SLC7A5Q01650 507 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 MRPL28Q13084 256 aaKnown RBP13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 ANKS6Q68DC2 871 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 TRIM8Q9BZR9 551 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 DBNDD1Q9H9R9 158 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 HPS4Q9NQG7 708 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 A0A0G2JND7 137 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 COPEO14579 308 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 SEC31AO94979 1220 aaKnown RBP13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 NR1D1P20393 614 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 SMARCA1P28370 1054 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 KRT39Q6A163 491 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 ZBTB38Q8NAP3 1195 aaPredicted RBP13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 ACAP3Q96P50 834 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 STN1Q9H668 368 aaKnown RBP13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 RNF14Q9UBS8 474 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 TJP2Q9UDY2 1190 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 HUS1O60921 280 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 GSPT1P15170 499 aaKnown RBP13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 DNAJC10Q8IXB1 793 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 SMYD4Q8IYR2 804 aaPredicted RBP13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 SSH2Q76I76 1423 aa13.71□□□□□ -0.21
SPTBN2-201ENST00000309996 TBC1D12O60347 775 aa13.71□□□□□ -0.22
SPTBN2-201ENST00000309996 UPP2O95045 317 aa13.71□□□□□ -0.22
SPTBN2-201ENST00000309996 CYP27A1Q02318 531 aa13.71□□□□□ -0.22
SPTBN2-201ENST00000309996 PHLPP2Q6ZVD8 1323 aa13.71□□□□□ -0.22
SPTBN2-201ENST00000309996 EDC3Q96F86 508 aaKnown RBP13.71□□□□□ -0.22
SPTBN2-201ENST00000309996 RUBCNLQ9H714 662 aa13.71□□□□□ -0.22
SPTBN2-201ENST00000309996 NOVA2Q9UNW9 492 aaKnown RBP13.71□□□□□ -0.22
SPTBN2-201ENST00000309996 LRRC41Q15345 812 aa13.71□□□□□ -0.22
SPTBN2-201ENST00000309996 OOSP2Q86WS3 158 aa13.71□□□□□ -0.22
SPTBN2-201ENST00000309996 TRIM62Q9BVG3 475 aa13.71□□□□□ -0.22
SPTBN2-201ENST00000309996 PPARGC1AQ9UBK2 798 aaKnown RBP13.71□□□□□ -0.22
SPTBN2-201ENST00000309996 EFTUD2Q15029 972 aaKnown RBP eCLIP13.7□□□□□ -0.225e-7■■■■■ 36.5
SPTBN2-201ENST00000309996 GIMAP8Q8ND71 665 aaPredicted RBP13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 HES6Q96HZ4 224 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 PRAG1Q86YV5 1406 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 AP1M1Q9BXS5 423 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 PITPNM3Q9BZ71 974 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 ECT2Q9H8V3 914 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 ARHGAP26Q9UNA1 814 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 PCDHA13Q9Y5I0 950 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 AATKQ6ZMQ8 1374 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 A0A0D9SFI3 127 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 ZNF197O14709 1029 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 PPP6R2O75170 966 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 UBE3AQ05086 875 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 ERICH1Q86X53 443 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 CAPN10Q9HC96 672 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 C5orf58C9J3I9 102 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 KRT37O76014 449 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 RALAP11233 206 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 AP1B1Q10567 949 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 LVRNQ6Q4G3 990 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 OLFML3Q9NRN5 406 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 ATP10DQ9P241 1426 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 KPNA7A9QM74 516 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 K7ERI5 159 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 PRRG1O14668 218 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 ZFXP17010 805 aaPredicted RBP13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 RGS9BPQ6ZS82 235 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 RNF135Q8IUD6 432 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 CCDC17Q96LX7 622 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 UHRF1BP1Q6BDS2 1440 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 GON4LQ3T8J9 2241 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 PJA2O43164 708 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 GCFC2P16383 781 aaKnown RBP13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 TEDDM1Q5T9Z0 273 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 C11orf96Q7Z7L8 435 aa13.7□□□□□ -0.22
SPTBN2-201ENST00000309996 SYCP2Q9BX26 1530 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 PRR23AA6NEV1 266 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 RCSD1Q6JBY9 416 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 SPON2Q9BUD6 331 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 POTEB3A0JP26 581 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 SEMA3EO15041 775 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 ATXN3P54252 364 aaPredicted RBP13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 SCRN1Q12765 414 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 SEPT2Q15019 361 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 ADCK5Q3MIX3 580 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 POTEBQ6S5H4 581 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 CATSPER3Q86XQ3 398 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 EXD1Q8NHP7 514 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 MAGEB10Q96LZ2 347 aaPredicted RBP13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 SPATA16Q9BXB7 569 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 TMEM60Q9H2L4 133 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 NEUROD4Q9HD90 331 aa13.69□□□□□ -0.22
SPTBN2-201ENST00000309996 ATP8B1O43520 1251 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms