RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 WDR24Q96S15 920 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 MPHOSPH6Q99547 160 aaKnown RBP9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 THAP9Q9H5L6 903 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 SOWAHBA6NEL2 793 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 GJC1P36383 396 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 GFPT1Q06210 699 aaPredicted RBP9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 AFG1LQ8WV93 481 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 AGTPBP1Q9UPW5 1226 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 LAMA3Q16787 3333 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 CYP3A7-CYP3A51PA0A087WV96 503 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 RGS20O76081 388 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 ARIH2O95376 493 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 CYP3A7P24462 503 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 MAGEA1P43355 309 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 BRI3BPQ8WY22 251 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 GDAP1L1Q96MZ0 367 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 FBXO40Q9UH90 709 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 PNMA3Q9UL41 463 aa9.4□□□□□ -0.9
LCLAT1-201ENST00000309052 SRGAP2O75044 1071 aa9.4□□□□□ -0.91
LCLAT1-201ENST00000309052 MYL1P05976 194 aa9.4□□□□□ -0.91
LCLAT1-201ENST00000309052 LRRC63Q05C16 580 aa9.4□□□□□ -0.91
LCLAT1-201ENST00000309052 C2CD6Q53TS8 623 aa9.4□□□□□ -0.91
LCLAT1-201ENST00000309052 CYP26C1Q6V0L0 522 aa9.4□□□□□ -0.91
LCLAT1-201ENST00000309052 NRXN2Q9P2S2 1712 aa9.4□□□□□ -0.91
LCLAT1-201ENST00000309052 UBIAD1Q9Y5Z9 338 aa9.4□□□□□ -0.91
LCLAT1-201ENST00000309052 TNPO2O14787 897 aaKnown RBP9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 RHOXF2BP0C7M4 288 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 CYP4F22Q6NT55 531 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 ADAT2Q7Z6V5 191 aaKnown RBP9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 RHOXF2Q9BQY4 288 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 TUFT1Q9NNX1 390 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 CYLC1P35663 651 aaPredicted RBP9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 KIF5AQ12840 1032 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 SCARA5Q6ZMJ2 495 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 C1orf186Q6ZWK4 172 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 ZIC5Q96T25 663 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 POLR3CQ9BUI4 534 aaPredicted RBP9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 IFIH1Q9BYX4 1025 aaKnown RBP9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 HDAC6Q9UBN7 1215 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 LIMA1Q9UHB6 759 aaKnown RBP9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 CYP3A4P08684 503 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 CDC25BP30305 580 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 NPTX2P47972 431 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 DLG4P78352 724 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 SESTD1Q86VW0 696 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 SLC35F6Q8N357 371 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 CDHR1Q96JP9 859 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 ZNF112Q9UJU3 913 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 SPDYE4A6NLX3 237 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 VTNP04004 478 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 JAK3P52333 1124 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 BEX3Q00994 111 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 ERCC6LQ2NKX8 1250 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 UBXN4Q92575 508 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 NHEJ1Q9H9Q4 299 aaPredicted RBP9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 UBE2TQ9NPD8 197 aaPredicted RBP9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 PACSIN2Q9UNF0 486 aaPredicted RBP9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 PPP2R3BQ9Y5P8 575 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 FHOD1Q9Y613 1164 aa9.39□□□□□ -0.91
LCLAT1-201ENST00000309052 EMSYQ7Z589 1322 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 DHX15O43143 795 aaKnown RBP9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 AFPP02771 609 aaKnown RBP9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 CETPP11597 493 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 CD58P19256 250 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 PSMC2P35998 433 aaKnown RBP9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 TFAMQ00059 246 aaKnown RBP9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 CETN1Q12798 172 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 PSMD2Q13200 908 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 SEMA3FQ13275 785 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 ORC2Q13416 577 aaPredicted RBP9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 SFMBT2Q5VUG0 894 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 U2AF1L4Q8WU68 220 aaKnown RBP9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 SEPT1Q8WYJ6 367 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 NRBP2Q9NSY0 501 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 MYO1AQ9UBC5 1043 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 CXCL11O14625 94 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 STX10O60499 249 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 NFX1Q12986 1120 aaKnown RBP9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 PPP2R5CQ13362 524 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 ARMCX2Q7L311 632 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 ZNF720Q7Z2F6 126 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 CHST13Q8NET6 341 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 JAKMIP2Q96AA8 810 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 TYW1Q9NV66 732 aaKnown RBP9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 DOCK3Q8IZD9 2030 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 ETF1P62495 437 aaKnown RBP9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 ELF2Q15723 593 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 MOXD1Q6UVY6 613 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 TMTC1Q8IUR5 882 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 CYP26B1Q9NR63 512 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 AGPAT3Q9NRZ7 376 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 NXF1Q9UBU9 619 aaKnown RBP9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 ANKRD63C9JTQ0 380 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 NDUFA10O95299 355 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 C6orf222P0C671 652 aaPredicted RBP9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 PPP2R3AQ06190 1150 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 EMC2Q15006 297 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 GBP6Q6ZN66 633 aa9.38□□□□□ -0.91
LCLAT1-201ENST00000309052 NLRP7Q8WX94 980 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms