RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ZNF710Q8N1W2 664 aa22.24■■□□□ 1.15
PDZRN3-202ENST00000308537 ZSCAN31Q96LW9 406 aaPredicted RBP22.24■■□□□ 1.15
PDZRN3-202ENST00000308537 HSD17B14Q9BPX1 270 aa22.24■■□□□ 1.15
PDZRN3-202ENST00000308537 DHX33Q9H6R0 707 aaKnown RBP22.24■■□□□ 1.15
PDZRN3-202ENST00000308537 C1orf112Q9NSG2 853 aa22.24■■□□□ 1.15
PDZRN3-202ENST00000308537 GRM6O15303 877 aa22.23■■□□□ 1.15
PDZRN3-202ENST00000308537 SLITRK3O94933 977 aa22.23■■□□□ 1.15
PDZRN3-202ENST00000308537 CD2BP2O95400 341 aaKnown RBP22.23■■□□□ 1.15
PDZRN3-202ENST00000308537 STAG3L1P0CL83 205 aa22.23■■□□□ 1.15
PDZRN3-202ENST00000308537 CTNNB1P35222 781 aa22.23■■□□□ 1.15
PDZRN3-202ENST00000308537 KCNQ1P51787 676 aa22.23■■□□□ 1.15
PDZRN3-202ENST00000308537 COL19A1Q14993 1142 aa22.23■■□□□ 1.15
PDZRN3-202ENST00000308537 FAM102BQ5T8I3 360 aa22.23■■□□□ 1.15
PDZRN3-202ENST00000308537 FBXO18Q8NFZ0 1043 aa22.23■■□□□ 1.15
PDZRN3-202ENST00000308537 DYDC2Q96IM9 177 aa22.23■■□□□ 1.15
PDZRN3-202ENST00000308537 SH2B1Q9NRF2 756 aaPredicted RBP22.23■■□□□ 1.15
PDZRN3-202ENST00000308537 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.22■■□□□ 1.15
PDZRN3-202ENST00000308537 CSDE1O75534 798 aaKnown RBP22.22■■□□□ 1.15
PDZRN3-202ENST00000308537 FGFR4P22455 802 aa22.22■■□□□ 1.15
PDZRN3-202ENST00000308537 ODR4Q5SWX8 454 aa22.22■■□□□ 1.15
PDZRN3-202ENST00000308537 NCAPH2Q6IBW4 605 aa22.22■■□□□ 1.15
PDZRN3-202ENST00000308537 HCSTQ9UBK5 93 aa22.22■■□□□ 1.15
PDZRN3-202ENST00000308537 COG5Q9UP83 839 aa22.22■■□□□ 1.15
PDZRN3-202ENST00000308537 ATF7P17544 494 aaPredicted RBP22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 CYP4A11Q02928 519 aa22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 CTTNQ14247 550 aaKnown RBP22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 SKIV2LQ15477 1246 aaKnown RBP22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 CALCRLQ16602 461 aa22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 PAN2Q504Q3 1202 aaKnown RBP22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 KSR1Q8IVT5 923 aa22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 SYMPKQ92797 1274 aaKnown RBP22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 C8orf76Q96K31 380 aa22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 PLVAPQ9BX97 442 aa22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 ELAC1Q9H777 363 aaKnown RBP22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 IFT122Q9HBG6 1241 aa22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 TMEM161AQ9NX61 479 aa22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 RWDD3Q9Y3V2 267 aa22.21■■□□□ 1.15
PDZRN3-202ENST00000308537 A0A087WZ62 844 aa22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 DENND3A2RUS2 1198 aa22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 NEMFO60524 1076 aa22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 LYPLA2O95372 231 aa22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 DNAJB1P25685 340 aa22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 YWHABP31946 246 aaKnown RBP22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 HMGN5P82970 282 aaKnown RBP22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 TRIM29Q14134 588 aa22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 RABEP1Q15276 862 aa22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 ZNF598Q86UK7 904 aaKnown RBP22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 P2RX5Q93086 422 aa22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 HLA-CQ95604 372 aa22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 EIF2AK1Q9BQI3 630 aaKnown RBP22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 FDXACB1Q9BRP7 624 aaPredicted RBP22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 C11orf84Q9BUA3 381 aaPredicted RBP22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 TTC12Q9H892 705 aaPredicted RBP22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 XPNPEP1Q9NQW7 623 aa22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 SUCLA2Q9P2R7 463 aaPredicted RBP22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 PCDHA12Q9UN75 941 aa22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 PLAGL2Q9UPG8 496 aa22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 PCDHB7Q9Y5E2 793 aa22.2■■□□□ 1.14
PDZRN3-202ENST00000308537 ITGB1P05556 798 aa22.19■■□□□ 1.14
PDZRN3-202ENST00000308537 FGFR1P11362 822 aa22.19■■□□□ 1.14
PDZRN3-202ENST00000308537 ZNF410Q86VK4 478 aa22.19■■□□□ 1.14
PDZRN3-202ENST00000308537 ADAMTS19Q8TE59 1207 aa22.19■■□□□ 1.14
PDZRN3-202ENST00000308537 FOXP1Q9H334 677 aaPredicted RBP22.19■■□□□ 1.14
PDZRN3-202ENST00000308537 ZSWIM4Q9H7M6 989 aa22.19■■□□□ 1.14
PDZRN3-202ENST00000308537 PPME1Q9Y570 386 aa22.19■■□□□ 1.14
PDZRN3-202ENST00000308537 POTEMA6NI47 508 aa22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 DKC1O60832 514 aaKnown RBP eCLIP22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 BAG4O95429 457 aaKnown RBP22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 PTPROQ16827 1216 aa22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 TIGD5Q53EQ6 642 aa22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 TCEAL5Q5H9L2 206 aa22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 ECHDC2Q86YB7 292 aa22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 RHPN2Q8IUC4 686 aa22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 SPPL3Q8TCT6 385 aa22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 NLRP7Q8WX94 980 aa22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 CEP170P1Q96L14 293 aa22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 LMAN2LQ9H0V9 348 aa22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 CWH43Q9H720 699 aa22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 UBE2ZQ9H832 354 aaPredicted RBP22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 ALG13Q9NP73 1137 aaKnown RBP22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 LRFN2Q9ULH4 789 aa22.18■■□□□ 1.14
PDZRN3-202ENST00000308537 A0A0U1RQF3 1178 aa22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 SPATA31C1P0DKV0 1188 aa22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 TXKP42681 527 aa22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 CDC42EP1Q00587 391 aa22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 CLLU1OSQ5K130 101 aa22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 LRRC55Q6ZSA7 311 aa22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 C4orf32Q8N8J7 132 aa22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 KLHL23Q8NBE8 558 aa22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 TMEM143Q96AN5 459 aa22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 NECAB3Q96P71 396 aaPredicted RBP22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 CASD1Q96PB1 797 aa22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 TRAIPQ9BWF2 469 aa22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 GCOM2Q9BZD3 368 aaPredicted RBP22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 NSUN3Q9H649 340 aaKnown RBP22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 MINDY3Q9H8M7 445 aa22.17■■□□□ 1.14
PDZRN3-202ENST00000308537 TBKBP1A7MCY6 615 aa22.16■■□□□ 1.14
PDZRN3-202ENST00000308537 MARCH6O60337 910 aa22.16■■□□□ 1.14
PDZRN3-202ENST00000308537 IBSPP21815 317 aaPredicted RBP22.16■■□□□ 1.14
PDZRN3-202ENST00000308537 U2AF2P26368 475 aaKnown RBP eCLIP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms