RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 IRX5P78411 483 aaPredicted RBP12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 LMNB2Q03252 620 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 HHATQ5VTY9 493 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 CASC4Q6P4E1 433 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 DEFB132Q7Z7B7 95 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 PROCA1Q8NCQ7 364 aaPredicted RBP12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 P3H4Q92791 437 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 OSBPL9Q96SU4 736 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 TRIM7Q9C029 511 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 POLR3FQ9H1D9 316 aaPredicted RBP12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 KCND2Q9NZV8 630 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 KIF13AQ9H1H9 1805 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 CAPN9O14815 690 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 RNF40O75150 1001 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 MYBP10242 640 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 CAP2P40123 477 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 R3HDM1Q15032 1099 aaKnown RBP12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 LGSNQ5TDP6 509 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 PRAMEF18Q5VWM3 479 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 NFRKBQ6P4R8 1299 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 KCTD17Q8N5Z5 321 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 MSH4O15457 936 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 CTNND1O60716 968 aaKnown RBP12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 ECEL1O95672 775 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 GPC5P78333 572 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 SNX1Q13596 522 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 GRIK5Q16478 980 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 CC2D1AQ6P1N0 951 aaPredicted RBP12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 SCARA5Q6ZMJ2 495 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 MAP7D3Q8IWC1 876 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 PALM2Q8IXS6 379 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 GMCL1Q96IK5 515 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 DDX4Q9NQI0 724 aaKnown RBP12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 ATP8A1Q9Y2Q0 1164 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 MED7O43513 233 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 ATP1A1P05023 1023 aaKnown RBP12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 RFX1P22670 979 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 ITIH3Q06033 890 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 EMBQ6PCB8 327 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 MOXD1Q6UVY6 613 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 C15orf52Q6ZUT6 534 aaKnown RBP12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 GLYCTKQ8IVS8 523 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 RPUSD2Q8IZ73 545 aaKnown RBP12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 ANKRD42Q8N9B4 389 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 BCAS4Q8TDM0 211 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 EPC1Q9H2F5 836 aa12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 CNOT8Q9UFF9 292 aaKnown RBP12.31□□□□□ -0.44
PCDHGC3-201ENST00000308177 SSU72P8A0A1W2PR75 194 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 MIF4GDA9UHW6 222 aaKnown RBP12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 NCK2O43639 380 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 INPP5BP32019 993 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 RWDD2BP57060 319 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 DHX9Q08211 1270 aaKnown RBP12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 GLE1Q53GS7 698 aaKnown RBP12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 TIPINQ9BVW5 301 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 TADA3O75528 432 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 CYFIP1Q7L576 1253 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 CTAGE3PQ8IX95 158 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 MGARPQ8TDB4 240 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 WHAMMQ8TF30 809 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 POLR3CQ9BUI4 534 aaPredicted RBP12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 GGA3Q9NZ52 723 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 CYP11B2P19099 503 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 SOX5P35711 763 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 TRIM50Q86XT4 487 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 HAUS1Q96CS2 278 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 ERGIC2Q96RQ1 377 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 KCNH7Q9NS40 1196 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 LRRC4BQ9NT99 713 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 ADAM22Q9P0K1 906 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 NFU1Q9UMS0 254 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 CYTH3O43739 400 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 DGAT1O75907 488 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 UCHL3P15374 230 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 APOBEC3HQ6NTF7 200 aaKnown RBP12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 CAPN12Q6ZSI9 719 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 SYT2Q8N9I0 419 aaPredicted RBP12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 RPS6KC1Q96S38 1066 aa12.3□□□□□ -0.44
PCDHGC3-201ENST00000308177 STX2P32856 288 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 DR1Q01658 176 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 TTLL4Q14679 1199 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 Q3C1V9 767 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 ZC2HC1CQ53FD0 456 aaPredicted RBP12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 ZNF394Q53GI3 561 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 ZNF667Q5HYK9 610 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 ZNF746Q6NUN9 644 aaPredicted RBP12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 CCDC125Q86Z20 511 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 TAB3Q8N5C8 712 aaPredicted RBP12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 SMC6Q96SB8 1091 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 FAM49AQ9H0Q0 323 aaPredicted RBP12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 ANAPC7Q9UJX3 599 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 TMX2Q9Y320 296 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 NUB1Q9Y5A7 615 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 SREBF1P36956 1147 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 SF3A3Q12874 501 aaKnown RBP eCLIP12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 SLC18A3Q16572 532 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 XKR3Q5GH77 459 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 FYB2Q5VWT5 728 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms