RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 SOX5P35711 763 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 PTENP60484 403 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 HS2ST1Q7LGA3 356 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 JAMLQ86YT9 394 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 CCDC105Q8IYK2 499 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 LRRC34Q8IZ02 419 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 UBL4BQ8N7F7 174 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 CCT6BQ92526 530 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 SLC35C1Q96A29 364 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 MXD3Q9BW11 206 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 GGT7Q9UJ14 662 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 INTUQ9ULD6 942 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 PTPN22Q9Y2R2 807 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 MYH7BA7E2Y1 1941 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 C5orf60A6NFR6 353 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 PPFIA2O75334 1257 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 PSMC2P35998 433 aaKnown RBP12.69□□□□□ -0.38
FOXP4-201ENST00000307972 SLC12A3P55017 1021 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 GRAPQ13588 217 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 CCDC38Q502W7 563 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 GRAPLQ8TC17 118 aaPredicted RBP12.69□□□□□ -0.38
FOXP4-201ENST00000307972 LRRC4CQ9HCJ2 640 aa12.69□□□□□ -0.38
FOXP4-201ENST00000307972 FGFR4P22455 802 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 USH1GQ495M9 461 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 HYIQ5T013 277 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 C6orf118Q5T5N4 469 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 SEL1L2Q5TEA6 688 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 TAOK1Q7L7X3 1001 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 SLFN11Q7Z7L1 901 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 GLT8D2Q9H1C3 349 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 NOD2Q9HC29 1040 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 DONSONQ9NYP3 566 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 DIS3Q9Y2L1 958 aaKnown RBP12.68□□□□□ -0.38
FOXP4-201ENST00000307972 FRMD4BQ9Y2L6 1034 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 FAM187AA6NFU0 413 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 SCP2P22307 547 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 NPEPPSP55786 919 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 IFI35P80217 286 aaPredicted RBP12.68□□□□□ -0.38
FOXP4-201ENST00000307972 KCNA1Q09470 495 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 XRCC4Q13426 336 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 LLGL1Q15334 1064 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 CARD9Q9H257 536 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 KCNK9Q9NPC2 374 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 SERPINB13Q9UIV8 391 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 GGA1Q9UJY5 639 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 RABGAP1Q9Y3P9 1069 aa12.68□□□□□ -0.38
FOXP4-201ENST00000307972 RASGRF2O14827 1237 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 TMEM253P0C7T8 217 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 GHRP10912 638 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 ADCY2Q08462 1091 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 LACTB2Q53H82 288 aaPredicted RBP12.67□□□□□ -0.38
FOXP4-201ENST00000307972 SYCP3Q8IZU3 236 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 BANK1Q8NDB2 785 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 LNX1Q8TBB1 728 aaPredicted RBP12.67□□□□□ -0.38
FOXP4-201ENST00000307972 THAP2Q9H0W7 228 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 STXBP5LQ9Y2K9 1186 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 CHMP2AO43633 222 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 KIF1CO43896 1103 aaKnown RBP12.67□□□□□ -0.38
FOXP4-201ENST00000307972 ARHGAP4P98171 946 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 DHX34Q14147 1143 aaKnown RBP12.67□□□□□ -0.38
FOXP4-201ENST00000307972 PLS1Q14651 629 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 QRICH1Q2TAL8 776 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 OTUD6AQ7L8S5 288 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 CROCCP2Q86T23 111 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 C18orf8Q96DM3 657 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 ERVK-5Q9HDB9 667 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 COL22A1Q8NFW1 1626 aaPredicted RBP12.67□□□□□ -0.38
FOXP4-201ENST00000307972 DOT1LQ8TEK3 1739 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 DNAJC8O75937 253 aaPredicted RBP12.67□□□□□ -0.38
FOXP4-201ENST00000307972 TRIM49P0CI25 452 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 TRIM49CP0CI26 452 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 GTF2IP78347 998 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 ELF3P78545 371 aaPredicted RBP12.67□□□□□ -0.38
FOXP4-201ENST00000307972 MYO1EQ12965 1108 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 CALCOCO2Q13137 446 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 MAPK7Q13164 816 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 MESDQ14696 234 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 LRRC14Q15048 493 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 KIRREL3Q8IZU9 778 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 ANKRD42Q8N9B4 389 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 SYT2Q8N9I0 419 aaPredicted RBP12.67□□□□□ -0.38
FOXP4-201ENST00000307972 CNBD1Q8NA66 436 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 PIGOQ8TEQ8 1089 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 TLCD1Q96CP7 247 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 FAM212AQ96EL1 285 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 SEMA4AQ9H3S1 761 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 PARP2Q9UGN5 583 aa12.67□□□□□ -0.38
FOXP4-201ENST00000307972 DBR1Q9UK59 544 aaKnown RBP12.67□□□□□ -0.38
FOXP4-201ENST00000307972 ATP6V1G2O95670 118 aa12.66□□□□□ -0.38
FOXP4-201ENST00000307972 HLA-DOAP06340 250 aa12.66□□□□□ -0.38
FOXP4-201ENST00000307972 RHBDL3P58872 404 aa12.66□□□□□ -0.38
FOXP4-201ENST00000307972 SNAP25P60880 206 aa12.66□□□□□ -0.38
FOXP4-201ENST00000307972 CLUL1Q15846 466 aa12.66□□□□□ -0.38
FOXP4-201ENST00000307972 DUPD1Q68J44 220 aa12.66□□□□□ -0.38
FOXP4-201ENST00000307972 AADACL2Q6P093 401 aa12.66□□□□□ -0.38
FOXP4-201ENST00000307972 TRPM8Q7Z2W7 1104 aa12.66□□□□□ -0.38
FOXP4-201ENST00000307972 EPS8L3Q8TE67 593 aaKnown RBP12.66□□□□□ -0.38
FOXP4-201ENST00000307972 ARHGEF26Q96DR7 871 aa12.66□□□□□ -0.38
FOXP4-201ENST00000307972 STK33Q9BYT3 514 aa12.66□□□□□ -0.38
FOXP4-201ENST00000307972 HOMER3Q9NSC5 361 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms