RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 LAMC2Q13753 1193 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 SCFD2Q8WU76 684 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 PLCB1Q9NQ66 1216 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 PDHBP11177 359 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 ITGA4P13612 1032 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 CHMP6Q96FZ7 201 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 ZDHHC15Q96MV8 337 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 NGRNQ9NPE2 291 aaKnown RBP11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 ERAP1Q9NZ08 941 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 A8MXQ7 604 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 C2CD2LO14523 706 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 BUB1BO60566 1050 aaPredicted RBP11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 GCLMP48507 274 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 NME3Q13232 169 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 EFCAB12Q6NXP0 572 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 USP50Q70EL3 339 aaPredicted RBP11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 TMEM63CQ9P1W3 806 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 GPR75-ASB3A0A0A6YYF3 556 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 LLGL1Q15334 1064 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 TMEM270Q6UE05 265 aa11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 DDX53Q86TM3 631 aaKnown RBP11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 AGO2Q9UKV8 859 aaKnown RBP11.52□□□□□ -0.57
SYNPO2-201ENST00000307142 ZWINTO95229 277 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 TUBBP07437 444 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 RALAP11233 206 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 MMP14P50281 582 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 BACE1P56817 501 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 COASYQ13057 564 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 NXNQ6DKJ4 435 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 DCLK2Q8N568 766 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 SH2D3AQ9BRG2 576 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 THAP9Q9H5L6 903 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 TYW1Q9NV66 732 aaKnown RBP11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 PGK2P07205 417 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 CYP2C9P11712 490 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 CDKL2Q92772 493 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 CARD6Q9BX69 1037 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 AAASQ9NRG9 546 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 GINM1Q9NU53 330 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 DONSONQ9NYP3 566 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 RGL1Q9NZL6 768 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 NR3C1P04150 777 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 NR3C2P08235 984 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 THOC5Q13769 683 aaKnown RBP11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 ARFGAP2Q8N6H7 521 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 FAM76AQ8TAV0 307 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 ENTPD7Q9NQZ7 604 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 STRIP2Q9ULQ0 834 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 VAMP7P51809 220 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 EFNA5P52803 228 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 MGARPQ8TDB4 240 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 CHAMP1Q96JM3 812 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 ZNF560Q96MR9 790 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 EFCC1Q9HA90 598 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 DYRK4Q9NR20 520 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 CASP14P31944 242 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 EHHADHQ08426 723 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 TUFT1Q9NNX1 390 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 HYOU1Q9Y4L1 999 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 TACC3Q9Y6A5 838 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 F8W8V4 182 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 M0QYV0 167 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 PLSCR1O15162 318 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 MAGEB2O15479 319 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 TRPA1O75762 1119 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 MYBP10242 640 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 PDIA6Q15084 440 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 GLB1LQ6UWU2 654 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 YME1L1Q96TA2 773 aa11.51□□□□□ -0.57
SYNPO2-201ENST00000307142 PMLP29590 882 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 GUCY2FP51841 1108 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 MMTAG2Q9BU76 263 aaKnown RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 CREB3O43889 395 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 SSTR3P32745 418 aaPredicted RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 RCAN1P53805 252 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 YWHAGP61981 247 aaKnown RBP eCLIP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 LMNB2Q03252 620 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 EPHA7Q15375 998 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 ERO1AQ96HE7 468 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 ZNF512BQ96KM6 892 aaPredicted RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 RILPQ96NA2 401 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 DPH5Q9H2P9 285 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 EPN1Q9Y6I3 576 aaPredicted RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 CCNE1P24864 410 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 RESTQ13127 1097 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 PTPN21Q16825 1174 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 DUOXA2Q1HG44 320 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 RESP18Q5W5W9 173 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 MYLK4Q86YV6 388 aaPredicted RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 GPD1LQ8N335 351 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 STARD7Q9NQZ5 370 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 PXDNLA1KZ92 1463 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 UBR1Q8IWV7 1749 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 LCP1P13796 627 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 HOXA7P31268 230 aaPredicted RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 RBL2Q08999 1139 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 PAN2Q504Q3 1202 aaKnown RBP11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 XKR3Q5GH77 459 aa11.5□□□□□ -0.57
SYNPO2-201ENST00000307142 CCDC13Q8IYE1 715 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms