RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 PLEKHG4Q58EX7 1191 aa12.23□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 C16orf59Q7L2K0 433 aa12.23□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 ZNF410Q86VK4 478 aa12.23□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 ZNF579Q8NAF0 562 aaKnown RBP12.23□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 DBF4BQ8NFT6 615 aa12.23□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 SLC9A7Q96T83 725 aa12.23□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 MMTAG2Q9BU76 263 aaKnown RBP12.23□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 GCOM2Q9BZD3 368 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 CSRNP2Q9H175 543 aa12.23□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 FBXO2Q9UK22 296 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 COL4A3BPQ9Y5P4 624 aa12.23□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 SLC4A7Q9Y6M7 1214 aa12.23□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 A0A087WWV3 80 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 E9PMD0 336 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 GPR182O15218 404 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 ASAP2O43150 1006 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 GPR32O75388 356 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 SSBP05455 408 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 CD52P31358 61 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 GRIN1Q05586 938 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 NFX1Q12986 1120 aaKnown RBP12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 DRP2Q13474 957 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 TFDP1Q14186 410 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 MXD4Q14582 209 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 GPNMBQ14956 572 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 HABP4Q5JVS0 413 aaKnown RBP12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 HYIQ5T013 277 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 PADI6Q6TGC4 694 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 MAEAQ7L5Y9 396 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 SYMPKQ92797 1274 aaKnown RBP12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 TMEM143Q96AN5 459 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 ZNF668Q96K58 619 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 CLIC6Q96NY7 704 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 PLIN2Q99541 437 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 FTHL17Q9BXU8 183 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 INO80BQ9C086 356 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 CCSER1Q9C0I3 900 aa12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 POLR3FQ9H1D9 316 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 A0A087WZ62 844 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 CUTAO60888 179 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 AMHP03971 560 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 PLCG1P19174 1290 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 SFPQP23246 707 aaKnown RBP eCLIP12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 PHKA2P46019 1235 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 ME1P48163 572 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 WDR5P61964 334 aaKnown RBP12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 GRB10Q13322 594 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 KARSQ15046 597 aaKnown RBP12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 LRIT3Q3SXY7 679 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 TMEM119Q4V9L6 283 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 SPECC1Q5M775 1068 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 FAM102BQ5T8I3 360 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 SPATA32Q96LK8 384 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 FDXACB1Q9BRP7 624 aaPredicted RBP12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 XPNPEP1Q9NQW7 623 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 PADI3Q9ULW8 664 aa12.21□□□□□ -0.45
CSPG4P1Y-201ENST00000306641 NLRC5Q86WI3 1866 aa12.21□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 DENND3A2RUS2 1198 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 PLA2G4BP0C869 781 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 SRGAP2CP0DJJ0 459 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 DARSP14868 501 aaKnown RBP12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ATP2A2P16615 1042 aaKnown RBP12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 CYP11B2P19099 503 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 EIF4BP23588 611 aaKnown RBP12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 LAMTOR4Q0VGL1 99 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 PPP2R5AQ15172 486 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 RASIP1Q5U651 963 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 RRAGBQ5VZM2 374 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 FAM43BQ6ZT52 329 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 FAM228AQ86W67 206 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 MYOCDQ8IZQ8 938 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 RNF149Q8NC42 400 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 TMEM40Q8WWA1 233 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 PRPF31Q8WWY3 499 aaKnown RBP12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 VWCEQ96DN2 955 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 EPSTI1Q96J88 318 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 IFT74Q96LB3 600 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 PNMA5Q96PV4 448 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 TIPINQ9BVW5 301 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ADAMTS10Q9H324 1103 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 AGO3Q9H9G7 860 aaKnown RBP12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 CDHR5Q9HBB8 845 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ERVK-5Q9HDB9 667 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 CXXC1Q9P0U4 656 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 STK17AQ9UEE5 414 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ZDHHC9Q9Y397 364 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 NOC2LQ9Y3T9 749 aaKnown RBP12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 TTC3P53804 2025 aa12.2□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 LRRIQ4A6NIV6 560 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 ERLIN2O94905 339 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 STAT6P42226 847 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 SMAD3P84022 425 aaKnown RBP12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 CCDC73Q6ZRK6 1079 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 CATSPER4Q7RTX7 472 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 KCNK18Q7Z418 384 aa12.19□□□□□ -0.46
CSPG4P1Y-201ENST00000306641 SRGAP1Q7Z6B7 1085 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms