RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 MYO6Q9UM54 1294 aa12.46□□□□□ -0.41
SCG2-201ENST00000305409 PCDHA10Q9Y5I2 948 aa12.46□□□□□ -0.41
SCG2-201ENST00000305409 RBBP6Q7Z6E9 1792 aaKnown RBP12.46□□□□□ -0.41
SCG2-201ENST00000305409 A0A087X0T9 212 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 RHOXF2BP0C7M4 288 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 FAM228BP0C875 321 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 FDX1P10109 184 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 PLS3P13797 630 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 MUTP22033 750 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 PTPROQ16827 1216 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 NOL9Q5SY16 702 aaKnown RBP12.46□□□□□ -0.42
SCG2-201ENST00000305409 HAUS6Q7Z4H7 955 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 BSNDQ8WZ55 320 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 SECISBP2LQ93073 1101 aaKnown RBP12.46□□□□□ -0.42
SCG2-201ENST00000305409 MAP7D2Q96T17 732 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 RHOXF2Q9BQY4 288 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 SIX2Q9NPC8 291 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 SEL1LQ9UBV2 794 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 FRMD4BQ9Y2L6 1034 aa12.46□□□□□ -0.42
SCG2-201ENST00000305409 NCK2O43639 380 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 PPP1R37O75864 691 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 AMPD2Q01433 879 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 KRT76Q01546 638 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 ASIC2Q16515 512 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 GBP6Q6ZN66 633 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 SRGAP1Q7Z6B7 1085 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 C4orf19Q8IY42 314 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 KCTD17Q8N5Z5 321 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 JPH1Q9HDC5 661 aaPredicted RBP12.45□□□□□ -0.42
SCG2-201ENST00000305409 KCND2Q9NZV8 630 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 SEPT9Q9UHD8 586 aaPredicted RBP12.45□□□□□ -0.42
SCG2-201ENST00000305409 DBR1Q9UK59 544 aaKnown RBP12.45□□□□□ -0.42
SCG2-201ENST00000305409 PPP2R3BQ9Y5P8 575 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 RLFQ13129 1914 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 SLC16A3O15427 465 aaKnown RBP12.45□□□□□ -0.42
SCG2-201ENST00000305409 SERPING1P05155 500 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 PGK2P07205 417 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 CXCR5P32302 372 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 JAK3P52333 1124 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 ACTR2P61160 394 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 PTK2Q05397 1052 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 RSRC2Q7L4I2 434 aaKnown RBP12.45□□□□□ -0.42
SCG2-201ENST00000305409 ZNF571Q7Z3V5 609 aaPredicted RBP12.45□□□□□ -0.42
SCG2-201ENST00000305409 NOA1Q8NC60 698 aaKnown RBP12.45□□□□□ -0.42
SCG2-201ENST00000305409 GPRASP2Q96D09 838 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 SAAL1Q96ER3 474 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 STRA6Q9BX79 667 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 METTL14Q9HCE5 456 aaKnown RBP12.45□□□□□ -0.42
SCG2-201ENST00000305409 SMARCAL1Q9NZC9 954 aa12.45□□□□□ -0.42
SCG2-201ENST00000305409 ANKRD63C9JTQ0 380 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 FMO5P49326 533 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 OAZ1P54368 228 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 MTERF2Q49AM1 385 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 WDR78Q5VTH9 848 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 IQCEQ6IPM2 695 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 STXBP4Q6ZWJ1 553 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 MTERF4Q7Z6M4 381 aaKnown RBP12.44□□□□□ -0.42
SCG2-201ENST00000305409 GOLGA1Q92805 767 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 IQCDQ96DY2 449 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 CCDC94Q9BW85 323 aaPredicted RBP12.44□□□□□ -0.42
SCG2-201ENST00000305409 PARD6BQ9BYG5 372 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 DMAC2Q9NW81 257 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 MYO1AQ9UBC5 1043 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 SLC9A2Q9UBY0 812 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 PHIPQ8WWQ0 1821 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 GFPT2O94808 682 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 H2AFXP16104 143 aaPredicted RBP12.44□□□□□ -0.42
SCG2-201ENST00000305409 NPTX2P47972 431 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 GCLMP48507 274 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 IRX3P78415 501 aaPredicted RBP12.44□□□□□ -0.42
SCG2-201ENST00000305409 MRPS25P82663 173 aaKnown RBP12.44□□□□□ -0.42
SCG2-201ENST00000305409 MKRN3Q13064 507 aaKnown RBP12.44□□□□□ -0.42
SCG2-201ENST00000305409 ARHGAP44Q17R89 818 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 LBX2Q6XYB7 198 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 IRF2BP2Q7Z5L9 587 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 MMS19Q96T76 1030 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 TXNRD2Q9NNW7 524 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 EHD2Q9NZN4 543 aa12.44□□□□□ -0.42
SCG2-201ENST00000305409 SFNP31947 248 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 PRKCEQ02156 737 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 Q3C1V9 767 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 SH3D19Q5HYK7 790 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 ZNF746Q6NUN9 644 aaPredicted RBP12.43□□□□□ -0.42
SCG2-201ENST00000305409 TRAPPC11Q7Z392 1133 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 PLEKHO2Q8TD55 490 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 CDCA5Q96FF9 252 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 POP1Q99575 1024 aaKnown RBP12.43□□□□□ -0.42
SCG2-201ENST00000305409 ZNF408Q9H9D4 720 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 DOCK5Q9H7D0 1870 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 RBAK-RBAKDNI3L0D1 243 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 ATP2A1O14983 1001 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 ECM2O94769 699 aaPredicted RBP12.43□□□□□ -0.42
SCG2-201ENST00000305409 STBD1O95210 358 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 LYPLA2O95372 231 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 IREB2P48200 963 aaKnown RBP12.43□□□□□ -0.42
SCG2-201ENST00000305409 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
SCG2-201ENST00000305409 CCDC127Q96BQ5 260 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 ACCSQ96QU6 501 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 EDEM3Q9BZQ6 932 aa12.43□□□□□ -0.42
SCG2-201ENST00000305409 SPATC1LQ9H0A9 340 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms