RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 SFI1A8K8P3 1242 aa14.05□□□□□ -0.16
TRIM35-201ENST00000305364 CTCFP49711 727 aaPredicted RBP14.05□□□□□ -0.16
TRIM35-201ENST00000305364 RPS8P62241 208 aaKnown RBP14.05□□□□□ -0.16
TRIM35-201ENST00000305364 PPP4R3CPQ6ZMV5 832 aa14.05□□□□□ -0.16
TRIM35-201ENST00000305364 LONP2Q86WA8 852 aa14.05□□□□□ -0.16
TRIM35-201ENST00000305364 SLC17A8Q8NDX2 589 aa14.05□□□□□ -0.16
TRIM35-201ENST00000305364 LRRC8CQ8TDW0 803 aa14.05□□□□□ -0.16
TRIM35-201ENST00000305364 SCFD2Q8WU76 684 aa14.05□□□□□ -0.16
TRIM35-201ENST00000305364 CHRNA3P32297 505 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 KCNJ1P48048 391 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 PLCB3Q01970 1234 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 SGO2Q562F6 1265 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 LRRC55Q6ZSA7 311 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 SFR1Q86XK3 245 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 EIF1ADQ8N9N8 165 aaKnown RBP14.04□□□□□ -0.16
TRIM35-201ENST00000305364 FAM84BQ96KN1 310 aaPredicted RBP14.04□□□□□ -0.16
TRIM35-201ENST00000305364 BLOC1S4Q9NUP1 217 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 MAD2L2Q9UI95 211 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 DIS3Q9Y2L1 958 aaKnown RBP14.04□□□□□ -0.16
TRIM35-201ENST00000305364 RTCBQ9Y3I0 505 aaKnown RBP14.04□□□□□ -0.16
TRIM35-201ENST00000305364 SYNGAP1Q96PV0 1343 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 TOPAZ1Q8N9V7 1692 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 CRELD2Q6UXH1 353 aaPredicted RBP14.04□□□□□ -0.16
TRIM35-201ENST00000305364 LRRC37BQ96QE4 947 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 ANKRD2Q9GZV1 360 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 SCOCQ9UIL1 159 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 N4BP2Q86UW6 1770 aaPredicted RBP14.04□□□□□ -0.16
TRIM35-201ENST00000305364 F8W031 263 aaPredicted RBP14.04□□□□□ -0.16
TRIM35-201ENST00000305364 CYP19A1P11511 503 aaPredicted RBP14.04□□□□□ -0.16
TRIM35-201ENST00000305364 DRAP1Q14919 205 aaPredicted RBP14.04□□□□□ -0.16
TRIM35-201ENST00000305364 ERICH1Q86X53 443 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 C18orf8Q96DM3 657 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 NAF1Q96HR8 494 aaKnown RBP14.04□□□□□ -0.16
TRIM35-201ENST00000305364 AIPL1Q9NZN9 384 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 ZNF219Q9P2Y4 722 aaPredicted RBP14.04□□□□□ -0.16
TRIM35-201ENST00000305364 NID2Q14112 1375 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 SLC37A4O43826 429 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 ATF2P15336 505 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 ANKRD35Q8N283 1001 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 NUDT12Q9BQG2 462 aa14.04□□□□□ -0.16
TRIM35-201ENST00000305364 USP17L5A8MUK1 530 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 NR3C1P04150 777 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 ANKRD20A2Q5SQ80 823 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 ANKRD20A1Q5TYW2 823 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 ANKRD20A3Q5VUR7 823 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 ARHGAP27Q6ZUM4 889 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 TRIM59Q8IWR1 403 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 SCYL3Q8IZE3 742 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 SPICE1Q8N0Z3 855 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 SH3RF3Q8TEJ3 882 aaPredicted RBP14.03□□□□□ -0.16
TRIM35-201ENST00000305364 VPS37BQ9H9H4 285 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 POTEFA5A3E0 1075 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 MAPK13O15264 365 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 POTEIP0CG38 1075 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 SLC16A2P36021 539 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 KNOP1Q1ED39 458 aaKnown RBP14.03□□□□□ -0.16
TRIM35-201ENST00000305364 POTEGQ6S5H5 508 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 POTEEQ6S8J3 1075 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 PPP1R21Q6ZMI0 780 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 COL23A1Q86Y22 540 aaPredicted RBP14.03□□□□□ -0.16
TRIM35-201ENST00000305364 ERP27Q96DN0 273 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 ZFATQ9P243 1243 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 NFAT5O94916 1531 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 PPIP5K2O43314 1243 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 MAPK7Q13164 816 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 ZNF746Q6NUN9 644 aaPredicted RBP14.03□□□□□ -0.16
TRIM35-201ENST00000305364 WDR66Q8TBY9 1149 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 NAP1L4Q99733 375 aaKnown RBP14.03□□□□□ -0.16
TRIM35-201ENST00000305364 IRAK4Q9NWZ3 460 aa14.03□□□□□ -0.16
TRIM35-201ENST00000305364 RASA4BC9J798 803 aa14.02□□□□□ -0.16
TRIM35-201ENST00000305364 RASA4O43374 803 aa14.02□□□□□ -0.16
TRIM35-201ENST00000305364 PSMC2P35998 433 aaKnown RBP14.02□□□□□ -0.16
TRIM35-201ENST00000305364 PDIA5Q14554 519 aa14.02□□□□□ -0.16
TRIM35-201ENST00000305364 DAGLBQ8NCG7 672 aa14.02□□□□□ -0.16
TRIM35-201ENST00000305364 PNMA5Q96PV4 448 aa14.02□□□□□ -0.16
TRIM35-201ENST00000305364 CARD10Q9BWT7 1032 aa14.02□□□□□ -0.16
TRIM35-201ENST00000305364 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.02□□□□□ -0.16
TRIM35-201ENST00000305364 CHORDC1Q9UHD1 332 aaPredicted RBP14.02□□□□□ -0.16
TRIM35-201ENST00000305364 ANAPC5Q9UJX4 755 aa14.02□□□□□ -0.16
TRIM35-201ENST00000305364 INTUQ9ULD6 942 aa14.02□□□□□ -0.16
TRIM35-201ENST00000305364 ATP2A1O14983 1001 aa14.02□□□□□ -0.16
TRIM35-201ENST00000305364 CTNNA2P26232 953 aa14.02□□□□□ -0.16
TRIM35-201ENST00000305364 HOXA7P31268 230 aaPredicted RBP14.02□□□□□ -0.16
TRIM35-201ENST00000305364 THEMIS2Q5TEJ8 643 aa14.02□□□□□ -0.16
TRIM35-201ENST00000305364 C12orf60Q5U649 245 aa14.02□□□□□ -0.16
TRIM35-201ENST00000305364 KCNK18Q7Z418 384 aa14.02□□□□□ -0.16
TRIM35-201ENST00000305364 ZC3H18Q86VM9 953 aaKnown RBP14.02□□□□□ -0.16
TRIM35-201ENST00000305364 CES2O00748 559 aa14.02□□□□□ -0.17
TRIM35-201ENST00000305364 CYTH3O43739 400 aa14.02□□□□□ -0.17
TRIM35-201ENST00000305364 SNX3O60493 162 aa14.02□□□□□ -0.17
TRIM35-201ENST00000305364 STAT3P40763 770 aa14.02□□□□□ -0.17
TRIM35-201ENST00000305364 RWDD2BP57060 319 aa14.02□□□□□ -0.17
TRIM35-201ENST00000305364 CENPTQ96BT3 561 aa14.02□□□□□ -0.17
TRIM35-201ENST00000305364 SPZ1Q9BXG8 430 aa14.02□□□□□ -0.17
TRIM35-201ENST00000305364 NYXQ9GZU5 481 aa14.02□□□□□ -0.17
TRIM35-201ENST00000305364 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.02□□□□□ -0.17
TRIM35-201ENST00000305364 CCDC160A6NGH7 325 aa14.01□□□□□ -0.17
TRIM35-201ENST00000305364 WTIPA6NIX2 430 aaPredicted RBP14.01□□□□□ -0.17
TRIM35-201ENST00000305364 AP1G2O75843 785 aa14.01□□□□□ -0.17
TRIM35-201ENST00000305364 SKIP12755 728 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms