RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 GDPD5Q8WTR4 605 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 ARNTL2Q8WYA1 636 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 BRMS1Q9HCU9 246 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 LMCD1Q9NZU5 365 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 SEPT9Q9UHD8 586 aaPredicted RBP12.62□□□□□ -0.39
CLCC1-201ENST00000302500 PCDHA12Q9UN75 941 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 MYH15Q9Y2K3 1946 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 H3BNC9 293 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 MED24O75448 989 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 SARSP49591 514 aaKnown RBP12.62□□□□□ -0.39
CLCC1-201ENST00000302500 RARRES1P49788 294 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLCC1-201ENST00000302500 CYP4A11Q02928 519 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 TBC1D8BQ0IIM8 1120 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 CTTNQ14247 550 aaKnown RBP12.62□□□□□ -0.39
CLCC1-201ENST00000302500 CATSPER3Q86XQ3 398 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 IFNLR1Q8IU57 520 aaPredicted RBP12.62□□□□□ -0.39
CLCC1-201ENST00000302500 KSR1Q8IVT5 923 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 METTL13Q8N6R0 699 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 PPP1R16BQ96T49 567 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 ZSWIM4Q9H7M6 989 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 MINDY3Q9H8M7 445 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.62□□□□□ -0.39
CLCC1-201ENST00000302500 PCDHB6Q9Y5E3 794 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 TRIOO75962 3097 aa12.61□□□□□ -0.39
CLCC1-201ENST00000302500 ST18O60284 1047 aa12.61□□□□□ -0.39
CLCC1-201ENST00000302500 CSDE1O75534 798 aaKnown RBP12.61□□□□□ -0.39
CLCC1-201ENST00000302500 UPP2O95045 317 aa12.61□□□□□ -0.39
CLCC1-201ENST00000302500 HOXA11P31270 313 aaPredicted RBP12.61□□□□□ -0.39
CLCC1-201ENST00000302500 MCM7P33993 719 aa12.61□□□□□ -0.39
CLCC1-201ENST00000302500 AMHR2Q16671 573 aa12.61□□□□□ -0.39
CLCC1-201ENST00000302500 TTC38Q5R3I4 469 aa12.61□□□□□ -0.39
CLCC1-201ENST00000302500 NCAPH2Q6IBW4 605 aa12.61□□□□□ -0.39
CLCC1-201ENST00000302500 SLC24A5Q71RS6 500 aa12.61□□□□□ -0.39
CLCC1-201ENST00000302500 ZNF410Q86VK4 478 aa12.61□□□□□ -0.39
CLCC1-201ENST00000302500 CMTR2Q8IYT2 770 aaKnown RBP12.61□□□□□ -0.39
CLCC1-201ENST00000302500 NEK9Q8TD19 979 aa12.61□□□□□ -0.39
CLCC1-201ENST00000302500 ZNF668Q96K58 619 aaPredicted RBP12.61□□□□□ -0.39
CLCC1-201ENST00000302500 GAS2L1Q99501 681 aaPredicted RBP12.61□□□□□ -0.39
CLCC1-201ENST00000302500 ADAM2Q99965 735 aa12.61□□□□□ -0.39
CLCC1-201ENST00000302500 MMTAG2Q9BU76 263 aaKnown RBP12.61□□□□□ -0.39
CLCC1-201ENST00000302500 POLR3CQ9BUI4 534 aaPredicted RBP12.61□□□□□ -0.39
CLCC1-201ENST00000302500 ELAC1Q9H777 363 aaKnown RBP12.61□□□□□ -0.39
CLCC1-201ENST00000302500 HCSTQ9UBK5 93 aa12.61□□□□□ -0.39
CLCC1-201ENST00000302500 TCEAL9Q9UHQ7 104 aa12.61□□□□□ -0.39
CLCC1-201ENST00000302500 MRPL42Q9Y6G3 142 aaKnown RBP12.61□□□□□ -0.39
CLCC1-201ENST00000302500 A0A087WZ62 844 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 DDX11L8A8MPP1 907 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 M0QZ92 97 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 GPR182O15218 404 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 FGFR4P22455 802 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 DNAJB1P25685 340 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 GJB2P29033 226 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 ARL2P36404 184 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 RFC5P40937 340 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 TXKP42681 527 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 MCM2P49736 904 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 TRIM29Q14134 588 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 ZNF174Q15697 407 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 LRRC55Q6ZSA7 311 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 TMEM192Q8IY95 271 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 PRPF31Q8WWY3 499 aaKnown RBP12.6□□□□□ -0.39
CLCC1-201ENST00000302500 SAMD11Q96NU1 681 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 YME1L1Q96TA2 773 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 FDXACB1Q9BRP7 624 aaPredicted RBP12.6□□□□□ -0.39
CLCC1-201ENST00000302500 ZBED2Q9BTP6 218 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 CWH43Q9H720 699 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 C1orf112Q9NSG2 853 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 ANKEF1Q9NU02 776 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 AKT3Q9Y243 479 aa12.6□□□□□ -0.39
CLCC1-201ENST00000302500 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.59□□□□□ -0.39
CLCC1-201ENST00000302500 A0A0U1RQF3 1178 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 OR52Z1P0C646 297 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 XRCC6P12956 609 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLCC1-201ENST00000302500 RPA1P27694 616 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 TMOD1P28289 359 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 BMPR1AP36894 532 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 POU5F1BQ06416 359 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 NFX1Q12986 1120 aaKnown RBP12.59□□□□□ -0.39
CLCC1-201ENST00000302500 EMC2Q15006 297 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 CLLU1OSQ5K130 101 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 UBXN11Q5T124 520 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 FAM102BQ5T8I3 360 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 FERMT3Q86UX7 667 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 SLC17A8Q8NDX2 589 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 LRRC15Q8TF66 581 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 CASD1Q96PB1 797 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 MAP7D2Q96T17 732 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 COL25A1Q9BXS0 654 aaPredicted RBP12.59□□□□□ -0.39
CLCC1-201ENST00000302500 NFKBIZQ9BYH8 718 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 TUFT1Q9NNX1 390 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 TMEM161AQ9NX61 479 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 SUCLA2Q9P2R7 463 aaPredicted RBP12.59□□□□□ -0.39
CLCC1-201ENST00000302500 DBR1Q9UK59 544 aaKnown RBP12.59□□□□□ -0.39
CLCC1-201ENST00000302500 MTUS1Q9ULD2 1270 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 GINS2Q9Y248 185 aa12.59□□□□□ -0.39
CLCC1-201ENST00000302500 TCF20Q9UGU0 1960 aaKnown RBP12.58□□□□□ -0.4
CLCC1-201ENST00000302500 A0A087WWV3 80 aa12.58□□□□□ -0.4
CLCC1-201ENST00000302500 MEIS3P2A8K0S8 358 aa12.58□□□□□ -0.4
CLCC1-201ENST00000302500 GRM6O15303 877 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms