RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 MAGEB2O15479 319 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 CAPN2P17655 700 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 GLRA2P23416 452 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 TBC1D8BQ0IIM8 1120 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 LRRC26Q2I0M4 334 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 CAVIN1Q6NZI2 390 aaKnown RBP10.53□□□□□ -0.72
RFX3-201ENST00000302303 TRAF7Q6Q0C0 670 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 ANKRD33Q7Z3H0 272 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 KSR1Q8IVT5 923 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 GLIS3Q8NEA6 775 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 PRPF31Q8WWY3 499 aaKnown RBP10.53□□□□□ -0.72
RFX3-201ENST00000302303 NTPCRQ9BSD7 190 aaKnown RBP10.53□□□□□ -0.72
RFX3-201ENST00000302303 STRA6Q9BX79 667 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 NUP62CLQ9H1M0 184 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 CDHR5Q9HBB8 845 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 ATP6V0A4Q9HBG4 840 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 KIAA1468Q9P260 1216 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 ODF2LQ9ULJ1 636 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 ADGRA3Q8IWK6 1321 aa10.52□□□□□ -0.72
RFX3-201ENST00000302303 LOXHD1Q8IVV2 1947 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 PVALEFA0A1B0GWK0 134 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 GPR32O75388 356 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 RHOBTB3O94955 611 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 RPN1P04843 607 aaKnown RBP10.52□□□□□ -0.73
RFX3-201ENST00000302303 MYL1P05976 194 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 PTMSP20962 102 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 CASP5P51878 434 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 POLGP54098 1239 aaPredicted RBP10.52□□□□□ -0.73
RFX3-201ENST00000302303 ATN1P54259 1190 aaPredicted RBP10.52□□□□□ -0.73
RFX3-201ENST00000302303 RTP1P59025 263 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 AMPD3Q01432 767 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 FAAP100Q0VG06 881 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 SKOR2Q2VWA4 1001 aaPredicted RBP10.52□□□□□ -0.73
RFX3-201ENST00000302303 KMT5BQ4FZB7 885 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 IER5Q5VY09 327 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 UNC13DQ70J99 1090 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 RPAINQ86UA6 219 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 MCPH1Q8NEM0 835 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 DNAJB3Q8WWF6 145 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 SLC7A3Q8WY07 619 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 VTI1AQ96AJ9 217 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 TIPINQ9BVW5 301 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 ADAMTS10Q9H324 1103 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 SUGCTQ9HAC7 445 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 MAN1B1Q9UKM7 699 aa10.52□□□□□ -0.73
RFX3-201ENST00000302303 EVPLQ92817 2033 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 GAS2O43903 313 aaKnown RBP10.51□□□□□ -0.73
RFX3-201ENST00000302303 PPP1R37O75864 691 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 VTNP04004 478 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 CYP2C9P11712 490 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 PLS3P13797 630 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 HOXD13P35453 343 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 NPTX2P47972 431 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 STK4Q13043 487 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 COASYQ13057 564 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 CAPSQ13938 189 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 KCNB1Q14721 858 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 GPNMBQ14956 572 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 PTGISQ16647 500 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 FAM47CQ5HY64 1035 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 CCDC183Q5T5S1 534 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 FAM102BQ5T8I3 360 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 TAS1R3Q7RTX0 852 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 SFR1Q86XK3 245 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 KIAA0895Q8NCT3 520 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 KCNN1Q92952 543 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 GSDMAQ96QA5 445 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 FUCA2Q9BTY2 467 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 POLR3FQ9H1D9 316 aaPredicted RBP10.51□□□□□ -0.73
RFX3-201ENST00000302303 C11orf49Q9H6J7 331 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 IFT122Q9HBG6 1241 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 PANK4Q9NVE7 773 aa10.51□□□□□ -0.73
RFX3-201ENST00000302303 SUCLA2Q9P2R7 463 aaPredicted RBP10.51□□□□□ -0.73
RFX3-201ENST00000302303 CHRNA1P02708 482 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 EDN1P05305 212 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 IQCF3P0C7M6 154 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 GNAT1P11488 350 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 ASIC1P78348 528 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 TLE2Q04725 743 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 RBL2Q08999 1139 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 MGAT3Q09327 533 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 LAMTOR4Q0VGL1 99 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 PTK7Q13308 1070 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 MORC3Q14149 939 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 TRIM60Q495X7 471 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 ISM2Q6H9L7 571 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 EPM2AIP1Q7L775 607 aaPredicted RBP10.5□□□□□ -0.73
RFX3-201ENST00000302303 ZNF720Q7Z2F6 126 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 NECAB2Q7Z6G3 386 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 EXOC8Q8IYI6 725 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 METTL13Q8N6R0 699 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 TMEM40Q8WWA1 233 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 KIFAP3Q92845 792 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 VWCEQ96DN2 955 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 ZNF668Q96K58 619 aaPredicted RBP10.5□□□□□ -0.73
RFX3-201ENST00000302303 TOX2Q96NM4 488 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 MED15Q96RN5 788 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 SEZ6LQ9BYH1 1024 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 LRRC27Q9C0I9 530 aa10.5□□□□□ -0.73
RFX3-201ENST00000302303 MINDY3Q9H8M7 445 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms