RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 GRIN2CQ14957 1233 aa20.33■□□□□ 0.84
SPSB3-201ENST00000301717 SF3A1Q15459 793 aaKnown RBP20.33■□□□□ 0.84
SPSB3-201ENST00000301717 DTHD1Q6ZMT9 781 aa20.33■□□□□ 0.84
SPSB3-201ENST00000301717 SNX29Q8TEQ0 813 aa20.33■□□□□ 0.84
SPSB3-201ENST00000301717 SLC7A3Q8WY07 619 aa20.33■□□□□ 0.84
SPSB3-201ENST00000301717 NLRP4Q96MN2 994 aa20.33■□□□□ 0.84
SPSB3-201ENST00000301717 FDXACB1Q9BRP7 624 aaPredicted RBP20.33■□□□□ 0.84
SPSB3-201ENST00000301717 POLR3CQ9BUI4 534 aaPredicted RBP20.33■□□□□ 0.84
SPSB3-201ENST00000301717 CLIC4Q9Y696 253 aa20.33■□□□□ 0.84
SPSB3-201ENST00000301717 USO1O60763 962 aaKnown RBP20.32■□□□□ 0.84
SPSB3-201ENST00000301717 RPA1P27694 616 aa20.32■□□□□ 0.84
SPSB3-201ENST00000301717 CEBPZQ03701 1054 aaKnown RBP20.32■□□□□ 0.84
SPSB3-201ENST00000301717 PKP1Q13835 747 aa20.32■□□□□ 0.84
SPSB3-201ENST00000301717 MAEAQ7L5Y9 396 aa20.32■□□□□ 0.84
SPSB3-201ENST00000301717 USP38Q8NB14 1042 aa20.32■□□□□ 0.84
SPSB3-201ENST00000301717 ERMNQ8TAM6 284 aa20.32■□□□□ 0.84
SPSB3-201ENST00000301717 MMTAG2Q9BU76 263 aaKnown RBP20.32■□□□□ 0.84
SPSB3-201ENST00000301717 ANKEF1Q9NU02 776 aa20.32■□□□□ 0.84
SPSB3-201ENST00000301717 SQORQ9Y6N5 450 aa20.32■□□□□ 0.84
SPSB3-201ENST00000301717 COL6A3P12111 3177 aa20.32■□□□□ 0.84
SPSB3-201ENST00000301717 LOXHD1Q8IVV2 1947 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 EYSQ5T1H1 3165 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 LAD1O00515 517 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 SLC34A2O95436 690 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 RFC5P40937 340 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 PRPHP41219 470 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 DNM2P50570 870 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 ZRSR1Q15695 479 aaKnown RBP20.31■□□□□ 0.84
SPSB3-201ENST00000301717 PPP2R2DQ66LE6 453 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 PRPF31Q8WWY3 499 aaKnown RBP20.31■□□□□ 0.84
SPSB3-201ENST00000301717 CCDC43Q96MW1 224 aaKnown RBP20.31■□□□□ 0.84
SPSB3-201ENST00000301717 PLIN2Q99541 437 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 MTRQ99707 1265 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 SLC28A3Q9HAS3 691 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 POLD4Q9HCU8 107 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 GPRC5CQ9NQ84 441 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 KIAA1024Q9UPX6 916 aa20.31■□□□□ 0.84
SPSB3-201ENST00000301717 DARSP14868 501 aaKnown RBP20.3■□□□□ 0.84
SPSB3-201ENST00000301717 PDIA5Q14554 519 aa20.3■□□□□ 0.84
SPSB3-201ENST00000301717 KCNK18Q7Z418 384 aa20.3■□□□□ 0.84
SPSB3-201ENST00000301717 ASAP3Q8TDY4 903 aa20.3■□□□□ 0.84
SPSB3-201ENST00000301717 MYLIPQ8WY64 445 aa20.3■□□□□ 0.84
SPSB3-201ENST00000301717 TOP1MTQ969P6 601 aa20.3■□□□□ 0.84
SPSB3-201ENST00000301717 CDX2Q99626 313 aaPredicted RBP20.3■□□□□ 0.84
SPSB3-201ENST00000301717 PRDM12Q9H4Q4 367 aa20.3■□□□□ 0.84
SPSB3-201ENST00000301717 DDX19AQ9NUU7 478 aaKnown RBP20.3■□□□□ 0.84
SPSB3-201ENST00000301717 SRGAP2CP0DJJ0 459 aa20.29■□□□□ 0.84
SPSB3-201ENST00000301717 EIF4BP23588 611 aaKnown RBP20.29■□□□□ 0.84
SPSB3-201ENST00000301717 TAP1Q03518 808 aa20.29■□□□□ 0.84
SPSB3-201ENST00000301717 LAMTOR4Q0VGL1 99 aa20.29■□□□□ 0.84
SPSB3-201ENST00000301717 HAUS3Q68CZ6 603 aa20.29■□□□□ 0.84
SPSB3-201ENST00000301717 NACC1Q96RE7 527 aa20.29■□□□□ 0.84
SPSB3-201ENST00000301717 ADAM2Q99965 735 aa20.29■□□□□ 0.84
SPSB3-201ENST00000301717 COL4A3BPQ9Y5P4 624 aa20.29■□□□□ 0.84
SPSB3-201ENST00000301717 ARID2Q68CP9 1835 aa20.29■□□□□ 0.84
SPSB3-201ENST00000301717 EPOPA6NHQ4 379 aa20.28■□□□□ 0.84
SPSB3-201ENST00000301717 E9PMD0 336 aa20.28■□□□□ 0.84
SPSB3-201ENST00000301717 RFXAPO00287 272 aa20.28■□□□□ 0.84
SPSB3-201ENST00000301717 GATMP50440 423 aa20.28■□□□□ 0.84
SPSB3-201ENST00000301717 FOXD4L6Q3SYB3 417 aaPredicted RBP20.28■□□□□ 0.84
SPSB3-201ENST00000301717 FOXD4L3Q6VB84 417 aaPredicted RBP20.28■□□□□ 0.84
SPSB3-201ENST00000301717 PSPC1Q8WXF1 523 aaKnown RBP20.28■□□□□ 0.84
SPSB3-201ENST00000301717 USP28Q96RU2 1077 aa20.28■□□□□ 0.84
SPSB3-201ENST00000301717 RAD9AQ99638 391 aa20.28■□□□□ 0.84
SPSB3-201ENST00000301717 JPH2Q9BR39 696 aaPredicted RBP20.28■□□□□ 0.84
SPSB3-201ENST00000301717 RAB34Q9BZG1 259 aa20.28■□□□□ 0.84
SPSB3-201ENST00000301717 TSPYL2Q9H2G4 693 aaPredicted RBP20.28■□□□□ 0.84
SPSB3-201ENST00000301717 MINDY3Q9H8M7 445 aa20.28■□□□□ 0.84
SPSB3-201ENST00000301717 ATP6V0A4Q9HBG4 840 aa20.28■□□□□ 0.84
SPSB3-201ENST00000301717 MTUS1Q9ULD2 1270 aa20.28■□□□□ 0.84
SPSB3-201ENST00000301717 GPR182O15218 404 aa20.27■□□□□ 0.84
SPSB3-201ENST00000301717 MARCKSP29966 332 aaPredicted RBP20.27■□□□□ 0.84
SPSB3-201ENST00000301717 PTPAQ15257 358 aa20.27■□□□□ 0.84
SPSB3-201ENST00000301717 KRT79Q5XKE5 535 aa20.27■□□□□ 0.84
SPSB3-201ENST00000301717 PNMA5Q96PV4 448 aa20.27■□□□□ 0.84
SPSB3-201ENST00000301717 FTHL17Q9BXU8 183 aa20.27■□□□□ 0.84
SPSB3-201ENST00000301717 GCOM2Q9BZD3 368 aaPredicted RBP20.27■□□□□ 0.84
SPSB3-201ENST00000301717 POLR3FQ9H1D9 316 aaPredicted RBP20.27■□□□□ 0.84
SPSB3-201ENST00000301717 BHMT2Q9H2M3 363 aa20.27■□□□□ 0.84
SPSB3-201ENST00000301717 IFT122Q9HBG6 1241 aa20.27■□□□□ 0.84
SPSB3-201ENST00000301717 DBR1Q9UK59 544 aaKnown RBP20.27■□□□□ 0.84
SPSB3-201ENST00000301717 PPME1Q9Y570 386 aa20.27■□□□□ 0.84
SPSB3-201ENST00000301717 TMEM265A0A087WTH1 108 aa20.27■□□□□ 0.83
SPSB3-201ENST00000301717 DENND3A2RUS2 1198 aa20.27■□□□□ 0.83
SPSB3-201ENST00000301717 ARHGEF35A5YM69 484 aa20.27■□□□□ 0.83
SPSB3-201ENST00000301717 DGAT1O75907 488 aa20.27■□□□□ 0.83
SPSB3-201ENST00000301717 HTRA4P83105 476 aaPredicted RBP20.27■□□□□ 0.83
SPSB3-201ENST00000301717 DSC3Q14574 896 aa20.27■□□□□ 0.83
SPSB3-201ENST00000301717 ARL6IP4Q66PJ3 421 aaKnown RBP20.27■□□□□ 0.83
SPSB3-201ENST00000301717 RNF149Q8NC42 400 aa20.27■□□□□ 0.83
SPSB3-201ENST00000301717 YME1L1Q96TA2 773 aa20.27■□□□□ 0.83
SPSB3-201ENST00000301717 LINC01553A4QN01 128 aa20.26■□□□□ 0.83
SPSB3-201ENST00000301717 XRCC6P12956 609 aaKnown RBP eCLIP20.26■□□□□ 0.83
SPSB3-201ENST00000301717 GLRA2P23416 452 aa20.26■□□□□ 0.83
SPSB3-201ENST00000301717 ARL2P36404 184 aa20.26■□□□□ 0.83
SPSB3-201ENST00000301717 GRB10Q13322 594 aa20.26■□□□□ 0.83
SPSB3-201ENST00000301717 CAPSQ13938 189 aa20.26■□□□□ 0.83
SPSB3-201ENST00000301717 SPECC1Q5M775 1068 aa20.26■□□□□ 0.83
SPSB3-201ENST00000301717 PADI6Q6TGC4 694 aa20.26■□□□□ 0.83
SPSB3-201ENST00000301717 ZNF410Q86VK4 478 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms