RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 BLOC1S4Q9NUP1 217 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 CCDC160A6NGH7 325 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 CYP11B2P19099 503 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 STRN3Q13033 797 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 ZNF571Q7Z3V5 609 aaPredicted RBP14.35□□□□□ -0.11
CASC4-201ENST00000299957 USP38Q8NB14 1042 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 CEP170P1Q96L14 293 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 NT5C1BQ96P26 610 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 KIFC3Q9BVG8 833 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 VIPAS39Q9H9C1 493 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 NAGPAQ9UK23 515 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 SPAG7O75391 227 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 TRPC3Q13507 836 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 SHROOM1Q2M3G4 852 aaPredicted RBP14.34□□□□□ -0.11
CASC4-201ENST00000299957 LIN9Q5TKA1 542 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 ARHGEF16Q5VV41 709 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 PRR5LQ6MZQ0 368 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 CCDC137Q6PK04 289 aaKnown RBP14.34□□□□□ -0.11
CASC4-201ENST00000299957 RFX8Q6ZV50 586 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 SHISA4Q96DD7 197 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 CEP63Q96MT8 703 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 NACC1Q96RE7 527 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 C11orf70Q9BRQ4 267 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 ANAPC5Q9UJX4 755 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 USP20Q9Y2K6 914 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 LRRC10BA6NIK2 292 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 AKAP3O75969 853 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 FOSP01100 380 aaPredicted RBP14.34□□□□□ -0.11
CASC4-201ENST00000299957 HNRNPH1P31943 449 aaKnown RBP14.34□□□□□ -0.11
CASC4-201ENST00000299957 AADACL2Q6P093 401 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 CASC4Q6P4E1 433 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 PADI6Q6TGC4 694 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 CYFIP1Q7L576 1253 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 FMNL3Q8IVF7 1028 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 FAM84AQ96KN4 292 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 EFCC1Q9HA90 598 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 FBXO28Q9NVF7 368 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 CNOT8Q9UFF9 292 aaKnown RBP14.34□□□□□ -0.11
CASC4-201ENST00000299957 CASP5P51878 434 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 PMS2P54278 862 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 TRAF1Q13077 416 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 CUL1Q13616 776 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 NAB2Q15742 525 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 MTERF2Q49AM1 385 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 SCFD1Q8WVM8 642 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 MCUR1Q96AQ8 359 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 PRMT1Q99873 361 aaKnown RBP14.34□□□□□ -0.11
CASC4-201ENST00000299957 RUSC1Q9BVN2 902 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 TRIM7Q9C029 511 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.34□□□□□ -0.11
CASC4-201ENST00000299957 PSD3Q9NYI0 1048 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 SALL4Q9UJQ4 1053 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 PCDHB4Q9Y5E5 795 aa14.34□□□□□ -0.11
CASC4-201ENST00000299957 GCKP35557 465 aa14.33□□□□□ -0.11
CASC4-201ENST00000299957 VPS52Q8N1B4 723 aa14.33□□□□□ -0.11
CASC4-201ENST00000299957 MMGT1Q8N4V1 131 aa14.33□□□□□ -0.11
CASC4-201ENST00000299957 PI4K2AQ9BTU6 479 aa14.33□□□□□ -0.11
CASC4-201ENST00000299957 INTS2Q9H0H0 1204 aaKnown RBP14.33□□□□□ -0.11
CASC4-201ENST00000299957 NXF1Q9UBU9 619 aaKnown RBP14.33□□□□□ -0.11
CASC4-201ENST00000299957 SEPT9Q9UHD8 586 aaPredicted RBP14.33□□□□□ -0.11
CASC4-201ENST00000299957 F5H423 210 aaPredicted RBP14.33□□□□□ -0.12
CASC4-201ENST00000299957 SGK1O00141 431 aa14.33□□□□□ -0.12
CASC4-201ENST00000299957 CLDN3O15551 220 aa14.33□□□□□ -0.12
CASC4-201ENST00000299957 NDUFB10O96000 172 aa14.33□□□□□ -0.12
CASC4-201ENST00000299957 SLC29A2Q14542 456 aa14.33□□□□□ -0.12
CASC4-201ENST00000299957 GLE1Q53GS7 698 aaKnown RBP14.33□□□□□ -0.12
CASC4-201ENST00000299957 CCDC89Q8N998 374 aa14.33□□□□□ -0.12
CASC4-201ENST00000299957 LXNQ9BS40 222 aa14.33□□□□□ -0.12
CASC4-201ENST00000299957 THAP2Q9H0W7 228 aa14.33□□□□□ -0.12
CASC4-201ENST00000299957 TYW1Q9NV66 732 aaKnown RBP14.33□□□□□ -0.12
CASC4-201ENST00000299957 SSU72P8A0A1W2PR75 194 aa14.33□□□□□ -0.12
CASC4-201ENST00000299957 ZBTB33Q86T24 672 aa14.33□□□□□ -0.12
CASC4-201ENST00000299957 EPN3Q9H201 632 aa14.33□□□□□ -0.12
CASC4-201ENST00000299957 DCTN4Q9UJW0 460 aa14.33□□□□□ -0.12
CASC4-201ENST00000299957 GRID2IPA4D2P6 1211 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 CALCAP01258 141 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 CHN1P15882 459 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 C16orf86Q6ZW13 317 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 ELOA2Q8IYF1 753 aaPredicted RBP14.32□□□□□ -0.12
CASC4-201ENST00000299957 ATG4AQ8WYN0 398 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 NUP85Q9BW27 656 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 MAK16Q9BXY0 300 aaKnown RBP14.32□□□□□ -0.12
CASC4-201ENST00000299957 MRPL11Q9Y3B7 192 aaKnown RBP14.32□□□□□ -0.12
CASC4-201ENST00000299957 GOLGA8RI6L899 631 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 SUN1O94901 812 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 CA4P22748 312 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 PDIA5Q14554 519 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 ZNF507Q8TCN5 953 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 CYFIP2Q96F07 1278 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 KMT5AQ9NQR1 393 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 KLC4Q9NSK0 619 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 PCDHAC2Q9Y5I4 1007 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 LRRD1A4D1F6 860 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 CCDC188H7C350 402 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 HSPA1LP34931 641 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 AMPD2Q01433 879 aa14.32□□□□□ -0.12
CASC4-201ENST00000299957 DMP1Q13316 513 aaPredicted RBP14.32□□□□□ -0.12
CASC4-201ENST00000299957 ZRSR2Q15696 482 aaKnown RBP14.32□□□□□ -0.12
CASC4-201ENST00000299957 MIIPQ5JXC2 388 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms