RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 GBA2Q9HCG7 927 aaPredicted RBP28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 CYP26B1Q9NR63 512 aa28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 ARHGAP20Q9P2F6 1191 aa28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 LRRC37A2A6NM11 1700 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 CCDC169A6NNP5 214 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 ATG7O95352 703 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 NPTX2P47972 431 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 POLR2FP61218 127 aaKnown RBP28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 TSR1Q2NL82 804 aaKnown RBP28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 DPY19L2P1Q6NXN4 242 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 DRC1Q96MC2 740 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 FAM184BQ9ULE4 1060 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 UBE4BO95155 1302 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 SLC16A3O15427 465 aaKnown RBP28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 GGPS1O95749 300 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 AFPP02771 609 aaKnown RBP28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 ARHGAP25P42331 645 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 STXBP4Q6ZWJ1 553 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 OTUD6AQ7L8S5 288 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 ZNF302Q9NR11 478 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 PLAGL2Q9UPG8 496 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 ADGRA3Q8IWK6 1321 aa28.12■■■□□ 2.09
SDCCAG3-201ENST00000298537 NAA30Q147X3 362 aaPredicted RBP28.11■■■□□ 2.09
SDCCAG3-201ENST00000298537 ZNF397Q8NF99 534 aaPredicted RBP28.11■■■□□ 2.09
SDCCAG3-201ENST00000298537 PDLIM7Q9NR12 457 aa28.11■■■□□ 2.09
SDCCAG3-201ENST00000298537 KIF2AO00139 706 aaPredicted RBP28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 TRIM49P0CI25 452 aa28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 TRIM49CP0CI26 452 aa28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 NCKAP1LP55160 1127 aa28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 CYP27A1Q02318 531 aa28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 COPS5Q92905 334 aa28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 MAFBQ9Y5Q3 323 aaPredicted RBP28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 PSMC2P35998 433 aaKnown RBP28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 GTF2BQ00403 316 aa28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 PDXDC1Q6P996 788 aa28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 CACNA2D4Q7Z3S7 1137 aa28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 TMEM161BQ8NDZ6 487 aa28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 NMRK2Q9NPI5 230 aa28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 PDGFCQ9NRA1 345 aa28.1■■■□□ 2.09
SDCCAG3-201ENST00000298537 ARID2Q68CP9 1835 aa28.09■■■□□ 2.09
SDCCAG3-201ENST00000298537 ZNF263O14978 683 aa28.09■■■□□ 2.09
SDCCAG3-201ENST00000298537 NFIL3Q16649 462 aa28.09■■■□□ 2.09
SDCCAG3-201ENST00000298537 GANQ9H2C0 597 aa28.09■■■□□ 2.09
SDCCAG3-201ENST00000298537 RCCD1A6NED2 376 aa28.09■■■□□ 2.09
SDCCAG3-201ENST00000298537 TLR2O60603 784 aa28.09■■■□□ 2.09
SDCCAG3-201ENST00000298537 ECM2O94769 699 aaPredicted RBP28.09■■■□□ 2.09
SDCCAG3-201ENST00000298537 LRRN4CLQ8ND94 238 aa28.09■■■□□ 2.09
SDCCAG3-201ENST00000298537 PTPN18Q99952 460 aa28.09■■■□□ 2.09
SDCCAG3-201ENST00000298537 ZNHIT6Q9NWK9 470 aaKnown RBP28.09■■■□□ 2.09
SDCCAG3-201ENST00000298537 AJAP1Q9UKB5 411 aaPredicted RBP28.09■■■□□ 2.09
SDCCAG3-201ENST00000298537 USP20Q9Y2K6 914 aa28.09■■■□□ 2.09
SDCCAG3-201ENST00000298537 MYH9P35579 1960 aaKnown RBP28.09■■■□□ 2.09
SDCCAG3-201ENST00000298537 ANKRD63C9JTQ0 380 aa28.08■■■□□ 2.09
SDCCAG3-201ENST00000298537 MAPTP10636 758 aaKnown RBP28.08■■■□□ 2.09
SDCCAG3-201ENST00000298537 HSDL1Q3SXM5 330 aa28.08■■■□□ 2.09
SDCCAG3-201ENST00000298537 TRIM50Q86XT4 487 aa28.08■■■□□ 2.09
SDCCAG3-201ENST00000298537 ACCSQ96QU6 501 aa28.08■■■□□ 2.09
SDCCAG3-201ENST00000298537 METTL14Q9HCE5 456 aaKnown RBP28.08■■■□□ 2.09
SDCCAG3-201ENST00000298537 DDX41Q9UJV9 622 aaKnown RBP28.08■■■□□ 2.09
SDCCAG3-201ENST00000298537 EXOC3O60645 756 aa28.08■■■□□ 2.09
SDCCAG3-201ENST00000298537 HNRNPH3P31942 346 aaKnown RBP28.08■■■□□ 2.09
SDCCAG3-201ENST00000298537 XKR3Q5GH77 459 aa28.08■■■□□ 2.09
SDCCAG3-201ENST00000298537 GJB7Q6PEY0 223 aa28.08■■■□□ 2.09
SDCCAG3-201ENST00000298537 TMEM143Q96AN5 459 aa28.08■■■□□ 2.09
SDCCAG3-201ENST00000298537 ZNFX1Q9P2E3 1918 aaKnown RBP28.08■■■□□ 2.09
SDCCAG3-201ENST00000298537 IGKV6D-21A0A0A0MT36 114 aa28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 GOLGA6L9A6NEM1 432 aa28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 PON1P27169 355 aa28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 DLG4P78352 724 aa28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 CST9Q5W186 159 aa28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 MROH8Q9H579 483 aa28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 CEP72Q9P209 647 aa28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 OATP04181 439 aa28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 CETPP11597 493 aa28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 GTF2F1P35269 517 aaKnown RBP eCLIP28.07■■■□□ 2.083e-7■□□□□ 9.7
SDCCAG3-201ENST00000298537 TCF7P36402 384 aaPredicted RBP28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 CBWD6Q4V339 395 aa28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 CBWD3Q5JTY5 395 aa28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 CBWD5Q5RIA9 395 aa28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 TIPINQ9BVW5 301 aa28.07■■■□□ 2.08
SDCCAG3-201ENST00000298537 PHLPP2Q6ZVD8 1323 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 DENND3A2RUS2 1198 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 GOLGA8IPA6NC78 632 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 GOLGA8JA6NMD2 632 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 DGAT1O75907 488 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 EIF4A3P38919 411 aaKnown RBP28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 DMP1Q13316 513 aaPredicted RBP28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 GPRC5AQ8NFJ5 357 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 POLR3FQ9H1D9 316 aaPredicted RBP28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 MLXIPQ9HAP2 919 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 KMT5AQ9NQR1 393 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 PNMA3Q9UL41 463 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 TBX20Q9UMR3 447 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 ADSSP30520 456 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 GTF2A2P52657 109 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 ARID5AQ03989 594 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 EXOC3L4Q17RC7 722 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 HGSNATQ68CP4 663 aa28.06■■■□□ 2.08
SDCCAG3-201ENST00000298537 TMEM206Q9H813 350 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms