RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 GCNT3O95395 438 aa27.18■■□□□ 1.94
GTF2A1-201ENST00000298173 ATP1A3P13637 1013 aa27.18■■□□□ 1.94
GTF2A1-201ENST00000298173 PRKAR2AP13861 404 aaKnown RBP27.18■■□□□ 1.94
GTF2A1-201ENST00000298173 EXOC8Q8IYI6 725 aa27.18■■□□□ 1.94
GTF2A1-201ENST00000298173 SPIRE2Q8WWL2 714 aa27.18■■□□□ 1.94
GTF2A1-201ENST00000298173 BSNDQ8WZ55 320 aa27.18■■□□□ 1.94
GTF2A1-201ENST00000298173 KAT2BQ92831 832 aa27.18■■□□□ 1.94
GTF2A1-201ENST00000298173 UPF3AQ9H1J1 476 aaKnown RBP27.18■■□□□ 1.94
GTF2A1-201ENST00000298173 PRPF6O94906 941 aaKnown RBP27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 F2P00734 622 aa27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 INSRRP14616 1297 aa27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 DEKP35659 375 aaKnown RBP27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 NCKAP1LP55160 1127 aa27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 PEX3P56589 373 aa27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 LRRC63Q05C16 580 aa27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 KNOP1Q1ED39 458 aaKnown RBP27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 ZC2HC1CQ53FD0 456 aaPredicted RBP27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 PCDHB13Q9Y5F0 798 aa27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 CCND3P30281 292 aaPredicted RBP27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 TBC1D8BQ0IIM8 1120 aa27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 SLC17A8Q8NDX2 589 aa27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 POLR3FQ9H1D9 316 aaPredicted RBP27.17■■□□□ 1.94
GTF2A1-201ENST00000298173 COL1A2P08123 1366 aa27.16■■□□□ 1.94
GTF2A1-201ENST00000298173 UBE4BO95155 1302 aa27.16■■□□□ 1.94
GTF2A1-201ENST00000298173 CNGA1P29973 690 aa27.16■■□□□ 1.94
GTF2A1-201ENST00000298173 NPTX2P47972 431 aa27.16■■□□□ 1.94
GTF2A1-201ENST00000298173 GTF2BQ00403 316 aa27.16■■□□□ 1.94
GTF2A1-201ENST00000298173 KCNA1Q09470 495 aa27.16■■□□□ 1.94
GTF2A1-201ENST00000298173 MKRN4PQ13434 485 aaPredicted RBP27.16■■□□□ 1.94
GTF2A1-201ENST00000298173 FSCN1Q16658 493 aaKnown RBP27.16■■□□□ 1.94
GTF2A1-201ENST00000298173 BRDTQ58F21 947 aaPredicted RBP27.16■■□□□ 1.94
GTF2A1-201ENST00000298173 IRF2BP1Q8IU81 584 aa27.16■■□□□ 1.94
GTF2A1-201ENST00000298173 NELFCDQ8IXH7 590 aa27.16■■□□□ 1.94
GTF2A1-201ENST00000298173 TMEM143Q96AN5 459 aa27.16■■□□□ 1.94
GTF2A1-201ENST00000298173 KAT6AQ92794 2004 aa27.16■■□□□ 1.94
GTF2A1-201ENST00000298173 GAS2O43903 313 aaKnown RBP27.15■■□□□ 1.94
GTF2A1-201ENST00000298173 BEX3Q00994 111 aa27.15■■□□□ 1.94
GTF2A1-201ENST00000298173 ALCAMQ13740 583 aa27.15■■□□□ 1.94
GTF2A1-201ENST00000298173 STXBP4Q6ZWJ1 553 aa27.15■■□□□ 1.94
GTF2A1-201ENST00000298173 TRAPPC12Q8WVT3 735 aa27.15■■□□□ 1.94
GTF2A1-201ENST00000298173 KCNN1Q92952 543 aa27.15■■□□□ 1.94
GTF2A1-201ENST00000298173 SRRTQ9BXP5 876 aaKnown RBP27.15■■□□□ 1.94
GTF2A1-201ENST00000298173 KCNG1Q9UIX4 513 aa27.15■■□□□ 1.94
GTF2A1-201ENST00000298173 TRAF3IP3Q9Y228 551 aa27.15■■□□□ 1.94
GTF2A1-201ENST00000298173 EVPLQ92817 2033 aa27.15■■□□□ 1.94
GTF2A1-201ENST00000298173 HAS3O00219 553 aa27.14■■□□□ 1.94
GTF2A1-201ENST00000298173 ADCY5O95622 1261 aa27.14■■□□□ 1.94
GTF2A1-201ENST00000298173 PLCB2Q00722 1185 aa27.14■■□□□ 1.94
GTF2A1-201ENST00000298173 DMP1Q13316 513 aaPredicted RBP27.14■■□□□ 1.94
GTF2A1-201ENST00000298173 TPD52L1Q16890 204 aaPredicted RBP27.14■■□□□ 1.94
GTF2A1-201ENST00000298173 HAUS6Q7Z4H7 955 aa27.14■■□□□ 1.94
GTF2A1-201ENST00000298173 SLAIN1Q8ND83 568 aa27.14■■□□□ 1.94
GTF2A1-201ENST00000298173 JPH2Q9BR39 696 aaPredicted RBP27.14■■□□□ 1.94
GTF2A1-201ENST00000298173 MYADML2A6NDP7 307 aa27.14■■□□□ 1.93
GTF2A1-201ENST00000298173 PDXKO00764 312 aa27.14■■□□□ 1.93
GTF2A1-201ENST00000298173 C22orf31O95567 290 aa27.14■■□□□ 1.93
GTF2A1-201ENST00000298173 RARBP10826 455 aa27.14■■□□□ 1.93
GTF2A1-201ENST00000298173 GLRA2P23416 452 aa27.14■■□□□ 1.93
GTF2A1-201ENST00000298173 SMTNP53814 917 aa27.14■■□□□ 1.93
GTF2A1-201ENST00000298173 DRP2Q13474 957 aa27.14■■□□□ 1.93
GTF2A1-201ENST00000298173 IER5Q5VY09 327 aa27.14■■□□□ 1.93
GTF2A1-201ENST00000298173 CSGALNACT2Q8N6G5 542 aa27.14■■□□□ 1.93
GTF2A1-201ENST00000298173 TMEM161BQ8NDZ6 487 aa27.14■■□□□ 1.93
GTF2A1-201ENST00000298173 THAP9Q9H5L6 903 aa27.14■■□□□ 1.93
GTF2A1-201ENST00000298173 K7ENM7 598 aa27.13■■□□□ 1.93
GTF2A1-201ENST00000298173 SLC16A4O15374 487 aa27.13■■□□□ 1.93
GTF2A1-201ENST00000298173 TGFB1I1O43294 461 aa27.13■■□□□ 1.93
GTF2A1-201ENST00000298173 FANCCQ00597 558 aa27.13■■□□□ 1.93
GTF2A1-201ENST00000298173 HSP90AA4PQ58FG1 418 aa27.13■■□□□ 1.93
GTF2A1-201ENST00000298173 PPP4R3CPQ6ZMV5 832 aa27.13■■□□□ 1.93
GTF2A1-201ENST00000298173 ASAP3Q8TDY4 903 aa27.13■■□□□ 1.93
GTF2A1-201ENST00000298173 NOC3LQ8WTT2 800 aaKnown RBP27.13■■□□□ 1.93
GTF2A1-201ENST00000298173 ANP32BQ92688 251 aaKnown RBP27.13■■□□□ 1.93
GTF2A1-201ENST00000298173 PDLIM2Q96JY6 352 aa27.13■■□□□ 1.93
GTF2A1-201ENST00000298173 TRIM17Q9Y577 477 aa27.13■■□□□ 1.93
GTF2A1-201ENST00000298173 ZMYM2Q9UBW7 1377 aa27.13■■□□□ 1.93
GTF2A1-201ENST00000298173 LRRC10BA6NIK2 292 aa27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 MAGEB2O15479 319 aa27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 KPNA6O60684 536 aa27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 ADAMTS4O75173 837 aa27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 C6orf222P0C671 652 aaPredicted RBP27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 PURAQ00577 322 aaKnown RBP27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 EDRF1Q3B7T1 1238 aa27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 APTXQ7Z2E3 356 aaKnown RBP27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 KSR1Q8IVT5 923 aa27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 ZC3H3Q8IXZ2 948 aaKnown RBP27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 LINC01465Q8N7H1 131 aa27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 TCP11Q8WWU5 503 aa27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 IFT74Q96LB3 600 aa27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 TSG101Q99816 390 aa27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 KMT5AQ9NQR1 393 aa27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 CENPFP49454 3210 aa27.12■■□□□ 1.93
GTF2A1-201ENST00000298173 CCDC169A6NNP5 214 aa27.11■■□□□ 1.93
GTF2A1-201ENST00000298173 KLRC1P26715 233 aa27.11■■□□□ 1.93
GTF2A1-201ENST00000298173 MARCH8Q5T0T0 291 aa27.11■■□□□ 1.93
GTF2A1-201ENST00000298173 LRRC55Q6ZSA7 311 aa27.11■■□□□ 1.93
GTF2A1-201ENST00000298173 TRIM5Q9C035 493 aa27.11■■□□□ 1.93
GTF2A1-201ENST00000298173 SUGCTQ9HAC7 445 aa27.11■■□□□ 1.93
GTF2A1-201ENST00000298173 TYW1Q9NV66 732 aaKnown RBP27.11■■□□□ 1.93
GTF2A1-201ENST00000298173 ARHGAP28Q9P2N2 729 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms