RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 NR2F2P24468 414 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 BTDP43251 543 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 SEC23AQ15436 765 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 HP1BP3Q5SSJ5 553 aaPredicted RBP16.06■□□□□ 0.16
SPIDR-201ENST00000297423 DCP1AQ9NPI6 582 aaPredicted RBP16.06■□□□□ 0.16
SPIDR-201ENST00000297423 AKAP11Q9UKA4 1901 aa16.06■□□□□ 0.16
SPIDR-201ENST00000297423 SNUPNO95149 360 aaKnown RBP16.05■□□□□ 0.16
SPIDR-201ENST00000297423 TMC3Q7Z5M5 1100 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 MAPKAPK5Q8IW41 473 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 ARHGEF10LQ9HCE6 1279 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 CEP72Q9P209 647 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 SIK3Q9Y2K2 1263 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 BRWD3Q6RI45 1802 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 LAMB2P55268 1798 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 KLRF2D3W0D1 207 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 ITIH3Q06033 890 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 TSNAXIP1Q2TAA8 658 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 RASIP1Q5U651 963 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 RCSD1Q6JBY9 416 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 AADACL2Q6P093 401 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 TMEM154Q6P9G4 183 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 USP17L2Q6R6M4 530 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 NEK8Q86SG6 692 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 DTX3LQ8TDB6 740 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 FBXO41Q8TF61 875 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 TMEM237Q96Q45 408 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 KBTBD4Q9NVX7 518 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 WDR91A4D1P6 747 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 MGRN1O60291 552 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 SLC8A3P57103 927 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 EXOC3L4Q17RC7 722 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 AGBL2Q5U5Z8 902 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 SRRM1Q8IYB3 904 aaKnown RBP16.05■□□□□ 0.16
SPIDR-201ENST00000297423 INPP4AQ96PE3 977 aaPredicted RBP16.05■□□□□ 0.16
SPIDR-201ENST00000297423 NUDCD1Q96RS6 583 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 OSGEPQ9NPF4 335 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 PCDHA6Q9UN73 950 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 PCDHA8Q9Y5H6 950 aa16.05■□□□□ 0.16
SPIDR-201ENST00000297423 ZBTB16Q05516 673 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 KCNH2Q12809 1159 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 MESDQ14696 234 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 DEFB132Q7Z7B7 95 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 TEKT4Q8WW24 435 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 COA7Q96BR5 231 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 PAPOLBQ9NRJ5 636 aaKnown RBP16.04■□□□□ 0.16
SPIDR-201ENST00000297423 PPP1R1BQ9UD71 204 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-201ENST00000297423 KIF3CO14782 793 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 PCP11498 1178 aaKnown RBP16.04■□□□□ 0.16
SPIDR-201ENST00000297423 C15orf52Q6ZUT6 534 aaKnown RBP16.04■□□□□ 0.16
SPIDR-201ENST00000297423 CCHCR1Q8TD31 782 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 GPCPD1Q9NPB8 672 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 NR2E1Q9Y466 385 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 USP15Q9Y4E8 981 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-201ENST00000297423 FRMPD2Q68DX3 1309 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-201ENST00000297423 A0A1W2PQJ5 194 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 DNAJC8O75937 253 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-201ENST00000297423 DDAH1O94760 285 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 PHLDB2Q86SQ0 1253 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 ZC3H18Q86VM9 953 aaKnown RBP16.04■□□□□ 0.16
SPIDR-201ENST00000297423 GLYCTKQ8IVS8 523 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 RUBCNQ92622 972 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 NAF1Q96HR8 494 aaKnown RBP16.04■□□□□ 0.16
SPIDR-201ENST00000297423 ZNF570Q96NI8 536 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 STMN4Q9H169 189 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-201ENST00000297423 METTL5Q9NRN9 209 aaKnown RBP16.04■□□□□ 0.16
SPIDR-201ENST00000297423 ZFATQ9P243 1243 aa16.04■□□□□ 0.16
SPIDR-201ENST00000297423 CFAP73A6NFT4 308 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 SPOPO43791 374 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 LUC7L3O95232 432 aaKnown RBP16.03■□□□□ 0.16
SPIDR-201ENST00000297423 TNFAIP3P21580 790 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 TARSP26639 723 aaKnown RBP16.03■□□□□ 0.16
SPIDR-201ENST00000297423 BYSLQ13895 437 aaKnown RBP16.03■□□□□ 0.16
SPIDR-201ENST00000297423 CYP4F22Q6NT55 531 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 RPUSD2Q8IZ73 545 aaKnown RBP16.03■□□□□ 0.16
SPIDR-201ENST00000297423 SH3RF3Q8TEJ3 882 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-201ENST00000297423 ARMCX3Q9UH62 379 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-201ENST00000297423 CCDC160A6NGH7 325 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 MEIS1O00470 390 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 COL1A1P02452 1464 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-201ENST00000297423 CHRNA5P30532 468 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 GPBP1Q86WP2 473 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 CD302Q8IX05 232 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 KIAA1024Q9UPX6 916 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 SSU72P8A0A1W2PR75 194 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 TLR2O60603 784 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 CCND1P24385 295 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 RWDD2BP57060 319 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 PICALMQ13492 652 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 ERMARDQ5T6L9 678 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 SPIRE2Q8WWL2 714 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 BAP1Q92560 729 aa16.03■□□□□ 0.16
SPIDR-201ENST00000297423 MYH6P13533 1939 aa16.02■□□□□ 0.16
SPIDR-201ENST00000297423 TMEM120BA0PK00 339 aa16.02■□□□□ 0.16
SPIDR-201ENST00000297423 REXO1Q8N1G1 1221 aaKnown RBP16.02■□□□□ 0.16
SPIDR-201ENST00000297423 TGS1Q96RS0 853 aaKnown RBP16.02■□□□□ 0.16
SPIDR-201ENST00000297423 E9PMD0 336 aa16.02■□□□□ 0.16
SPIDR-201ENST00000297423 PPIP5K2O43314 1243 aa16.02■□□□□ 0.16
SPIDR-201ENST00000297423 SPAG7O75391 227 aa16.02■□□□□ 0.16
SPIDR-201ENST00000297423 TDP2O95551 362 aa16.02■□□□□ 0.16
SPIDR-201ENST00000297423 USP11P51784 963 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms