RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 PLXNA1Q9UIW2 1896 aa23.44■■□□□ 1.34
SOX17-201ENST00000297316 K7ENM7 598 aa23.43■■□□□ 1.34
SOX17-201ENST00000297316 AKAP3O75969 853 aa23.43■■□□□ 1.34
SOX17-201ENST00000297316 FARP2O94887 1054 aaPredicted RBP23.43■■□□□ 1.34
SOX17-201ENST00000297316 NR3C1P04150 777 aa23.43■■□□□ 1.34
SOX17-201ENST00000297316 MIS18BP1Q6P0N0 1132 aa23.43■■□□□ 1.34
SOX17-201ENST00000297316 CALUO43852 315 aaPredicted RBP23.43■■□□□ 1.34
SOX17-201ENST00000297316 NOL4O94818 638 aa23.43■■□□□ 1.34
SOX17-201ENST00000297316 COPB2P35606 906 aa23.43■■□□□ 1.34
SOX17-201ENST00000297316 ERO1AQ96HE7 468 aa23.43■■□□□ 1.34
SOX17-201ENST00000297316 STRA6Q9BX79 667 aa23.43■■□□□ 1.34
SOX17-201ENST00000297316 PPP1R37O75864 691 aa23.42■■□□□ 1.34
SOX17-201ENST00000297316 ECM2O94769 699 aaPredicted RBP23.42■■□□□ 1.34
SOX17-201ENST00000297316 ARHGAP29Q52LW3 1261 aa23.42■■□□□ 1.34
SOX17-201ENST00000297316 ANKRD23Q86SG2 305 aa23.42■■□□□ 1.34
SOX17-201ENST00000297316 GSTTP1A0A1W2PQM5 241 aa23.42■■□□□ 1.34
SOX17-201ENST00000297316 LRRC53A6NM62 1247 aa23.42■■□□□ 1.34
SOX17-201ENST00000297316 TISP43B9A030 160 aa23.42■■□□□ 1.34
SOX17-201ENST00000297316 GGPS1O95749 300 aa23.42■■□□□ 1.34
SOX17-201ENST00000297316 PLS3P13797 630 aa23.42■■□□□ 1.34
SOX17-201ENST00000297316 PEX3P56589 373 aa23.42■■□□□ 1.34
SOX17-201ENST00000297316 HUNKP57058 714 aa23.42■■□□□ 1.34
SOX17-201ENST00000297316 ZNF397Q8NF99 534 aaPredicted RBP23.42■■□□□ 1.34
SOX17-201ENST00000297316 ZNHIT6Q9NWK9 470 aaKnown RBP23.42■■□□□ 1.34
SOX17-201ENST00000297316 LARSQ9P2J5 1176 aaKnown RBP23.42■■□□□ 1.34
SOX17-201ENST00000297316 PLAGL2Q9UPG8 496 aa23.42■■□□□ 1.34
SOX17-201ENST00000297316 TRPM7Q96QT4 1865 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 IGSF9BQ9UPX0 1349 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 ATG7O95352 703 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 HNRNPH3P31942 346 aaKnown RBP23.41■■□□□ 1.34
SOX17-201ENST00000297316 ZNF569Q5MCW4 686 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 RRAGAQ7L523 313 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 PDCL2Q8N4E4 241 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 SHCBP1Q8NEM2 672 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 PCYT2Q99447 389 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 KIFC3Q9BVG8 833 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 LSM14BQ9BX40 385 aaKnown RBP23.41■■□□□ 1.34
SOX17-201ENST00000297316 ARHGAP20Q9P2F6 1191 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 KCNH2Q12809 1159 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 OTUD6AQ7L8S5 288 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 NEK11Q8NG66 645 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 IQCDQ96DY2 449 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 PKNOX2Q96KN3 472 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 ZNF302Q9NR11 478 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 PDGFCQ9NRA1 345 aa23.41■■□□□ 1.34
SOX17-201ENST00000297316 RCCD1A6NED2 376 aa23.4■■□□□ 1.34
SOX17-201ENST00000297316 SLC16A4O15374 487 aa23.4■■□□□ 1.34
SOX17-201ENST00000297316 KIF5CO60282 957 aa23.4■■□□□ 1.34
SOX17-201ENST00000297316 MTERF2Q49AM1 385 aa23.4■■□□□ 1.34
SOX17-201ENST00000297316 SLC35F6Q8N357 371 aa23.4■■□□□ 1.34
SOX17-201ENST00000297316 BSNDQ8WZ55 320 aa23.4■■□□□ 1.34
SOX17-201ENST00000297316 DDX41Q9UJV9 622 aaKnown RBP23.4■■□□□ 1.34
SOX17-201ENST00000297316 SLC45A1Q9Y2W3 748 aa23.4■■□□□ 1.34
SOX17-201ENST00000297316 PCDHB13Q9Y5F0 798 aa23.4■■□□□ 1.34
SOX17-201ENST00000297316 ZNF263O14978 683 aa23.39■■□□□ 1.34
SOX17-201ENST00000297316 ZBTB48P10074 688 aaPredicted RBP23.39■■□□□ 1.34
SOX17-201ENST00000297316 CDK17Q00537 523 aa23.39■■□□□ 1.34
SOX17-201ENST00000297316 PDXDC1Q6P996 788 aa23.39■■□□□ 1.34
SOX17-201ENST00000297316 FRMD5Q7Z6J6 570 aa23.39■■□□□ 1.34
SOX17-201ENST00000297316 COPS5Q92905 334 aa23.39■■□□□ 1.34
SOX17-201ENST00000297316 NLRC4Q9NPP4 1024 aa23.39■■□□□ 1.34
SOX17-201ENST00000297316 XPNPEP1Q9NQW7 623 aa23.39■■□□□ 1.34
SOX17-201ENST00000297316 CYP26B1Q9NR63 512 aa23.39■■□□□ 1.34
SOX17-201ENST00000297316 ARMCX3Q9UH62 379 aaPredicted RBP23.39■■□□□ 1.34
SOX17-201ENST00000297316 MAFBQ9Y5Q3 323 aaPredicted RBP23.39■■□□□ 1.34
SOX17-201ENST00000297316 ADORA2AP29274 412 aa23.39■■□□□ 1.33
SOX17-201ENST00000297316 CYP27A1Q02318 531 aa23.39■■□□□ 1.33
SOX17-201ENST00000297316 DRC1Q96MC2 740 aa23.39■■□□□ 1.33
SOX17-201ENST00000297316 AGPAT3Q9NRZ7 376 aa23.39■■□□□ 1.33
SOX17-201ENST00000297316 FAM184BQ9ULE4 1060 aa23.39■■□□□ 1.33
SOX17-201ENST00000297316 ELF2Q15723 593 aa23.38■■□□□ 1.33
SOX17-201ENST00000297316 CARD6Q9BX69 1037 aa23.38■■□□□ 1.33
SOX17-201ENST00000297316 GBP3Q9H0R5 595 aa23.38■■□□□ 1.33
SOX17-201ENST00000297316 MRFAP1Q9Y605 127 aa23.38■■□□□ 1.33
SOX17-201ENST00000297316 CYP2J2P51589 502 aa23.38■■□□□ 1.33
SOX17-201ENST00000297316 CCNA1P78396 465 aa23.38■■□□□ 1.33
SOX17-201ENST00000297316 NEDD9Q14511 834 aa23.38■■□□□ 1.33
SOX17-201ENST00000297316 HSDL1Q3SXM5 330 aa23.38■■□□□ 1.33
SOX17-201ENST00000297316 HAUS6Q7Z4H7 955 aa23.38■■□□□ 1.33
SOX17-201ENST00000297316 SYCP3Q8IZU3 236 aa23.38■■□□□ 1.33
SOX17-201ENST00000297316 GTF3C2Q8WUA4 911 aaPredicted RBP23.38■■□□□ 1.33
SOX17-201ENST00000297316 MLXIPQ9HAP2 919 aa23.38■■□□□ 1.33
SOX17-201ENST00000297316 IGKV6D-21A0A0A0MT36 114 aa23.37■■□□□ 1.33
SOX17-201ENST00000297316 EIF3CLB5ME19 914 aaKnown RBP23.37■■□□□ 1.33
SOX17-201ENST00000297316 TGFB3P10600 412 aa23.37■■□□□ 1.33
SOX17-201ENST00000297316 CYLC1P35663 651 aaPredicted RBP23.37■■□□□ 1.33
SOX17-201ENST00000297316 XKR3Q5GH77 459 aa23.37■■□□□ 1.33
SOX17-201ENST00000297316 CHADLQ6NUI6 762 aa23.37■■□□□ 1.33
SOX17-201ENST00000297316 DPY19L2P1Q6NXN4 242 aa23.37■■□□□ 1.33
SOX17-201ENST00000297316 STXBP4Q6ZWJ1 553 aa23.37■■□□□ 1.33
SOX17-201ENST00000297316 CCDC170Q8IYT3 715 aa23.37■■□□□ 1.33
SOX17-201ENST00000297316 EIF3CQ99613 913 aaKnown RBP23.37■■□□□ 1.33
SOX17-201ENST00000297316 LACRTQ9GZZ8 138 aa23.37■■□□□ 1.33
SOX17-201ENST00000297316 PDLIM7Q9NR12 457 aa23.37■■□□□ 1.33
SOX17-201ENST00000297316 DOCK3Q8IZD9 2030 aa23.37■■□□□ 1.33
SOX17-201ENST00000297316 UBE4BO95155 1302 aa23.37■■□□□ 1.33
SOX17-201ENST00000297316 CCDC169A6NNP5 214 aa23.37■■□□□ 1.33
SOX17-201ENST00000297316 DKC1O60832 514 aaKnown RBP eCLIP23.37■■□□□ 1.33
SOX17-201ENST00000297316 TCF7P36402 384 aaPredicted RBP23.37■■□□□ 1.33
SOX17-201ENST00000297316 DCAF17Q5H9S7 520 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms