RNA–Protein interactions for RNA: ENST00000296946.6

T-201, Transcript of Brachyury protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene T, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-201ENST00000296946 SSBP05455 408 aaKnown RBP eCLIP19.67■□□□□ 0.74
T-201ENST00000296946 ERVK-9P63128 1117 aa19.67■□□□□ 0.74
T-201ENST00000296946 SPP2Q13103 211 aa19.67■□□□□ 0.74
T-201ENST00000296946 RPS6KA1Q15418 735 aa19.67■□□□□ 0.74
T-201ENST00000296946 FOXR2Q6PJQ5 311 aa19.67■□□□□ 0.74
T-201ENST00000296946 FAM228AQ86W67 206 aa19.67■□□□□ 0.74
T-201ENST00000296946 GMCL1Q96IK5 515 aa19.67■□□□□ 0.74
T-201ENST00000296946 CALR3Q96L12 384 aaKnown RBP19.67■□□□□ 0.74
T-201ENST00000296946 PPP1R11O60927 126 aaPredicted RBP19.66■□□□□ 0.74
T-201ENST00000296946 TAL1P17542 331 aaPredicted RBP19.66■□□□□ 0.74
T-201ENST00000296946 RNASE9P60153 205 aaKnown RBP19.66■□□□□ 0.74
T-201ENST00000296946 VGLL4Q14135 290 aa19.66■□□□□ 0.74
T-201ENST00000296946 IFI16Q16666 785 aaKnown RBP19.66■□□□□ 0.74
T-201ENST00000296946 QPCTQ16769 361 aa19.66■□□□□ 0.74
T-201ENST00000296946 KIAA0753Q2KHM9 967 aa19.66■□□□□ 0.74
T-201ENST00000296946 GPATCH4Q5T3I0 446 aaKnown RBP19.66■□□□□ 0.74
T-201ENST00000296946 HEATR3Q7Z4Q2 680 aa19.66■□□□□ 0.74
T-201ENST00000296946 DCAF4Q8WV16 495 aa19.66■□□□□ 0.74
T-201ENST00000296946 RAPGEF5Q92565 580 aa19.66■□□□□ 0.74
T-201ENST00000296946 LZTS2Q9BRK4 669 aa19.66■□□□□ 0.74
T-201ENST00000296946 RIC8AQ9NPQ8 531 aa19.66■□□□□ 0.74
T-201ENST00000296946 ZHX2Q9Y6X8 837 aa19.66■□□□□ 0.74
T-201ENST00000296946 BMP3P12645 472 aa19.66■□□□□ 0.74
T-201ENST00000296946 TMOD1P28289 359 aa19.66■□□□□ 0.74
T-201ENST00000296946 MTMR2Q13614 643 aa19.66■□□□□ 0.74
T-201ENST00000296946 BTNL10A8MVZ5 291 aa19.65■□□□□ 0.74
T-201ENST00000296946 ECHS1P30084 290 aa19.65■□□□□ 0.74
T-201ENST00000296946 CLNS1AP54105 237 aaKnown RBP19.65■□□□□ 0.74
T-201ENST00000296946 UAP1Q16222 522 aaPredicted RBP19.65■□□□□ 0.74
T-201ENST00000296946 ACTRT1Q8TDG2 376 aa19.65■□□□□ 0.74
T-201ENST00000296946 SCFD2Q8WU76 684 aa19.65■□□□□ 0.74
T-201ENST00000296946 UBLCP1Q8WVY7 318 aaPredicted RBP19.65■□□□□ 0.74
T-201ENST00000296946 CCT6BQ92526 530 aa19.65■□□□□ 0.74
T-201ENST00000296946 HVCN1Q96D96 273 aa19.65■□□□□ 0.74
T-201ENST00000296946 HOOK2Q96ED9 719 aa19.65■□□□□ 0.74
T-201ENST00000296946 CLMNQ96JQ2 1002 aa19.65■□□□□ 0.74
T-201ENST00000296946 NLRC4Q9NPP4 1024 aa19.65■□□□□ 0.74
T-201ENST00000296946 FBXO28Q9NVF7 368 aa19.65■□□□□ 0.74
T-201ENST00000296946 NOVA2Q9UNW9 492 aaKnown RBP19.65■□□□□ 0.74
T-201ENST00000296946 KCNK3O14649 394 aa19.65■□□□□ 0.74
T-201ENST00000296946 C10orf76Q5T2E6 689 aa19.65■□□□□ 0.74
T-201ENST00000296946 SAMD1Q6SPF0 538 aaPredicted RBP19.65■□□□□ 0.74
T-201ENST00000296946 GPIHBP1Q8IV16 184 aa19.65■□□□□ 0.74
T-201ENST00000296946 ANKS4BQ8N8V4 417 aa19.65■□□□□ 0.74
T-201ENST00000296946 OR2W6PQ8NHA6 318 aa19.65■□□□□ 0.74
T-201ENST00000296946 TBC1D5Q92609 795 aa19.65■□□□□ 0.74
T-201ENST00000296946 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.65■□□□□ 0.74
T-201ENST00000296946 STK17AQ9UEE5 414 aa19.65■□□□□ 0.74
T-201ENST00000296946 SNCAIPQ9Y6H5 919 aa19.65■□□□□ 0.74
T-201ENST00000296946 ATAD5Q96QE3 1844 aa19.64■□□□□ 0.74
T-201ENST00000296946 CCDC188H7C350 402 aa19.64■□□□□ 0.74
T-201ENST00000296946 SATB1Q01826 763 aa19.64■□□□□ 0.74
T-201ENST00000296946 KCNMA1Q12791 1236 aa19.64■□□□□ 0.74
T-201ENST00000296946 PSMD2Q13200 908 aa19.64■□□□□ 0.74
T-201ENST00000296946 HPS3Q969F9 1004 aa19.64■□□□□ 0.74
T-201ENST00000296946 COA7Q96BR5 231 aa19.64■□□□□ 0.74
T-201ENST00000296946 CENPTQ96BT3 561 aa19.64■□□□□ 0.74
T-201ENST00000296946 RSRC1Q96IZ7 334 aaKnown RBP19.64■□□□□ 0.74
T-201ENST00000296946 PICK1Q9NRD5 415 aa19.64■□□□□ 0.74
T-201ENST00000296946 PACSIN2Q9UNF0 486 aaPredicted RBP19.64■□□□□ 0.74
T-201ENST00000296946 STXBP3O00186 592 aa19.64■□□□□ 0.73
T-201ENST00000296946 PPP1R12BO60237 982 aaPredicted RBP19.64■□□□□ 0.73
T-201ENST00000296946 GBP2P32456 591 aaPredicted RBP19.64■□□□□ 0.73
T-201ENST00000296946 IKQ13123 557 aaPredicted RBP19.64■□□□□ 0.73
T-201ENST00000296946 KRT25Q7Z3Z0 450 aa19.64■□□□□ 0.73
T-201ENST00000296946 LRRC27Q9C0I9 530 aa19.64■□□□□ 0.73
T-201ENST00000296946 ZNF408Q9H9D4 720 aa19.64■□□□□ 0.73
T-201ENST00000296946 GOPCQ9HD26 462 aa19.64■□□□□ 0.73
T-201ENST00000296946 EMILIN3Q9NT22 766 aa19.64■□□□□ 0.73
T-201ENST00000296946 BARHL2Q9NY43 387 aa19.64■□□□□ 0.73
T-201ENST00000296946 CCNT1O60563 726 aaKnown RBP19.63■□□□□ 0.73
T-201ENST00000296946 CALRP27797 417 aaKnown RBP19.63■□□□□ 0.73
T-201ENST00000296946 SLC8A3P57103 927 aa19.63■□□□□ 0.73
T-201ENST00000296946 LRRC55Q6ZSA7 311 aa19.63■□□□□ 0.73
T-201ENST00000296946 CHMP6Q96FZ7 201 aa19.63■□□□□ 0.73
T-201ENST00000296946 FBXL5Q9UKA1 691 aa19.63■□□□□ 0.73
T-201ENST00000296946 BHMG1C9JSJ3 638 aaPredicted RBP19.63■□□□□ 0.73
T-201ENST00000296946 TLR2O60603 784 aa19.63■□□□□ 0.73
T-201ENST00000296946 SMARCA1P28370 1054 aa19.63■□□□□ 0.73
T-201ENST00000296946 TECP42680 631 aa19.63■□□□□ 0.73
T-201ENST00000296946 USP11P51784 963 aa19.63■□□□□ 0.73
T-201ENST00000296946 EIF3BP55884 814 aaKnown RBP19.63■□□□□ 0.73
T-201ENST00000296946 MAGOHP61326 146 aaKnown RBP19.63■□□□□ 0.73
T-201ENST00000296946 E2F5Q15329 346 aa19.63■□□□□ 0.73
T-201ENST00000296946 SPRED3Q2MJR0 410 aa19.63■□□□□ 0.73
T-201ENST00000296946 TLDC1Q6P9B6 456 aa19.63■□□□□ 0.73
T-201ENST00000296946 MAGOHBQ96A72 148 aaKnown RBP19.63■□□□□ 0.73
T-201ENST00000296946 CCDC189A1A4V9 331 aa19.62■□□□□ 0.73
T-201ENST00000296946 PPP1R12AO14974 1030 aaPredicted RBP19.62■□□□□ 0.73
T-201ENST00000296946 SART1O43290 800 aaKnown RBP19.62■□□□□ 0.73
T-201ENST00000296946 KIF4AO95239 1232 aa19.62■□□□□ 0.73
T-201ENST00000296946 IBSPP21815 317 aaPredicted RBP19.62■□□□□ 0.73
T-201ENST00000296946 KLHL30Q0D2K2 578 aa19.62■□□□□ 0.73
T-201ENST00000296946 BYSLQ13895 437 aaKnown RBP19.62■□□□□ 0.73
T-201ENST00000296946 TTLL12Q14166 644 aaPredicted RBP19.62■□□□□ 0.73
T-201ENST00000296946 NONOQ15233 471 aaKnown RBP eCLIP19.62■□□□□ 0.73
T-201ENST00000296946 LETM2Q2VYF4 491 aa19.62■□□□□ 0.73
T-201ENST00000296946 CCDC197Q8NCU1 140 aa19.62■□□□□ 0.73
T-201ENST00000296946 CCDC26Q8TAB7 109 aa19.62■□□□□ 0.73
T-201ENST00000296946 FAM212AQ96EL1 285 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms