RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 PBKQ96KB5 322 aa14.41□□□□□ -0.1
TNFRSF21-201ENST00000296861 TMBIM4Q9HC24 238 aa14.41□□□□□ -0.1
TNFRSF21-201ENST00000296861 RASAL2Q9UJF2 1139 aa14.41□□□□□ -0.1
TNFRSF21-201ENST00000296861 TAF1P21675 1872 aa14.41□□□□□ -0.1
TNFRSF21-201ENST00000296861 A0A1W2PRG0 241 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 ARHGEF35A5YM69 484 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 K7ENM7 598 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 DDX3XO00571 662 aaKnown RBP eCLIP14.4□□□□□ -0.18e-11■■■□□ 14.8
TNFRSF21-201ENST00000296861 GAS7O60861 476 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 DLATP10515 647 aaKnown RBP14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 HARSP12081 509 aaKnown RBP14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 MARCKSL1P49006 195 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 CCDC197Q8NCU1 140 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 KCNV2Q8TDN2 545 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 SLC20A1Q8WUM9 679 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 ARHGEF26Q96DR7 871 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 CHUKO15111 745 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 FTLP02792 175 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 MTMR3Q13615 1198 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 VPS72Q15906 364 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 SPRED3Q2MJR0 410 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 LRCH2Q5VUJ6 765 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 GSTA5Q7RTV2 222 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 SYCE1Q8N0S2 351 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 CCDC63Q8NA47 563 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 NEK9Q8TD19 979 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 CEP63Q96MT8 703 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 POP1Q99575 1024 aaKnown RBP14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 RAB17Q9H0T7 212 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 KCNQ5Q9NR82 932 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 POLLQ9UGP5 575 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 CPP00450 1065 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 SERPINB2P05120 415 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 ITGB3BPQ13352 177 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 NUGGCQ68CJ6 796 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 SEMA4AQ9H3S1 761 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 AFF2P51816 1311 aa14.4□□□□□ -0.1
TNFRSF21-201ENST00000296861 CLRN2A0PK11 232 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 MYL7Q01449 175 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 CETN1Q12798 172 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 MYO1EQ12965 1108 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 CUL1Q13616 776 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 UAP1Q16222 522 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 HOOK3Q86VS8 718 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 CPNE8Q86YQ8 564 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 VEZTQ9HBM0 779 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 TOGARAM1Q9Y4F4 1720 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 PLCB3Q01970 1234 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 TRIM68Q6AZZ1 485 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 SPIRE2Q8WWL2 714 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 L3MBTL1Q9Y468 752 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 HNRNPH3P31942 346 aaKnown RBP14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 PSMC2P35998 433 aaKnown RBP14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 PMS2P54278 862 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 GIT2Q14161 759 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 ARSHQ5FYA8 562 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 KAZNQ674X7 775 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 SPATS2Q86XZ4 545 aaKnown RBP14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 PIK3R5Q8WYR1 880 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 TAOK3Q9H2K8 898 aa14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 CTDP1Q9Y5B0 961 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF21-201ENST00000296861 PJA2O43164 708 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 GH2P01242 217 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 DAB2IPQ5VWQ8 1189 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 LRRC34Q8IZ02 419 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 KRT35Q92764 455 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 EIF2AK1Q9BQI3 630 aaKnown RBP14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 AMNQ9BXJ7 453 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 RIOX1Q9H6W3 641 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 ERVK-5Q9HDB9 667 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 TCP10L2B9ZVM9 353 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 FOXN3O00409 490 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 NEBLO76041 1014 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 NEDD9Q14511 834 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 PARP9Q8IXQ6 854 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 KAT5Q92993 513 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 QTRT2Q9H974 415 aaKnown RBP14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 SPEF2Q9C093 1822 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 TMEM150BA6NC51 233 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 FAM86B1E9PN63 330 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 F5H6K3 240 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 FAM86B2P0C5J1 330 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 FERP16591 822 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 SKOR1P84550 965 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 KLRC3Q07444 240 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 ASTE1Q2TB18 679 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 GPATCH4Q5T3I0 446 aaKnown RBP14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 LMBRD2Q68DH5 695 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 IRF2BP2Q7Z5L9 587 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 UBL4BQ8N7F7 174 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 ATG4AQ8WYN0 398 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 PWWP2AQ96N64 755 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 PCDHGC5Q9Y5F6 944 aa14.38□□□□□ -0.11
TNFRSF21-201ENST00000296861 LAMB4A4D0S4 1761 aa14.37□□□□□ -0.11
TNFRSF21-201ENST00000296861 GPR75-ASB3A0A0A6YYF3 556 aa14.37□□□□□ -0.11
TNFRSF21-201ENST00000296861 EML1O00423 815 aa14.37□□□□□ -0.11
TNFRSF21-201ENST00000296861 DNM1LO00429 736 aa14.37□□□□□ -0.11
TNFRSF21-201ENST00000296861 RASGRF2O14827 1237 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms