RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 HPS4Q9NQG7 708 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 KLHL11Q9NVR0 708 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 CTIFO43310 598 aaKnown RBP17.23■□□□□ 0.35
SSRP1-202ENST00000293880 TAC1P20366 129 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 FGFR4P22455 802 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 RNF25Q96BH1 459 aaPredicted RBP17.23■□□□□ 0.35
SSRP1-202ENST00000293880 ZCCHC17Q9NP64 241 aaKnown RBP17.23■□□□□ 0.35
SSRP1-202ENST00000293880 NEDD4P46934 1319 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 ATP6V1E1P36543 226 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 CRKLP46109 303 aaKnown RBP17.23■□□□□ 0.35
SSRP1-202ENST00000293880 ZC3H12BQ5HYM0 836 aaKnown RBP17.23■□□□□ 0.35
SSRP1-202ENST00000293880 NLRP14Q86W24 1093 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 OTULINQ96BN8 352 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 EDEM3Q9BZQ6 932 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 CPVLQ9H3G5 476 aa17.23■□□□□ 0.35
SSRP1-202ENST00000293880 PIH1D3Q9NQM4 214 aaKnown RBP17.23■□□□□ 0.35
SSRP1-202ENST00000293880 RAD23BP54727 409 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 FKBP3Q00688 224 aaKnown RBP17.22■□□□□ 0.35
SSRP1-202ENST00000293880 KCTD2Q14681 263 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 ZNF746Q6NUN9 644 aaPredicted RBP17.22■□□□□ 0.35
SSRP1-202ENST00000293880 KDELC2Q7Z4H8 507 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 KRT75O95678 551 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 PCCAP05165 728 aaPredicted RBP17.22■□□□□ 0.35
SSRP1-202ENST00000293880 MECOMQ03112 1051 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 MYO1EQ12965 1108 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 RESP18Q5W5W9 173 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 PLXNC1O60486 1568 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 MAP3K15Q6ZN16 1313 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 ALDH18A1P54886 795 aaKnown RBP17.22■□□□□ 0.35
SSRP1-202ENST00000293880 UBE3CQ15386 1083 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 C1orf228Q6PIY5 440 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 NGRNQ9NPE2 291 aaKnown RBP17.22■□□□□ 0.35
SSRP1-202ENST00000293880 CCDC151A5D8V7 595 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 PDE8BO95263 885 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 EIF2AK2P19525 551 aaKnown RBP17.22■□□□□ 0.35
SSRP1-202ENST00000293880 DYNC1I2Q13409 638 aaKnown RBP17.22■□□□□ 0.35
SSRP1-202ENST00000293880 TNFAIP1Q13829 316 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 IMPG1Q17R60 797 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 CC2D1AQ6P1N0 951 aaPredicted RBP17.22■□□□□ 0.35
SSRP1-202ENST00000293880 CCNYL1Q8N7R7 359 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 NUP85Q9BW27 656 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 ERBB4Q15303 1308 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 TJP3O95049 919 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 TRPC1P48995 793 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 AP1B1Q10567 949 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 TAF1BQ53T94 588 aaPredicted RBP17.22■□□□□ 0.35
SSRP1-202ENST00000293880 FBXL5Q9UKA1 691 aa17.22■□□□□ 0.35
SSRP1-202ENST00000293880 E2F8A0AVK6 867 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 POTEMA6NI47 508 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 ZSCAN20P17040 1043 aaPredicted RBP17.21■□□□□ 0.35
SSRP1-202ENST00000293880 MYL3P08590 195 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 MKRN4PQ13434 485 aaPredicted RBP17.21■□□□□ 0.35
SSRP1-202ENST00000293880 LBRQ14739 615 aaKnown RBP17.21■□□□□ 0.35
SSRP1-202ENST00000293880 TEX2Q8IWB9 1127 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 SLC26A7Q8TE54 656 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.21■□□□□ 0.35
SSRP1-202ENST00000293880 FSD1LQ9BXM9 530 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 KLHL8Q9P2G9 620 aaPredicted RBP17.21■□□□□ 0.35
SSRP1-202ENST00000293880 EIF3BP55884 814 aaKnown RBP17.21■□□□□ 0.35
SSRP1-202ENST00000293880 COPS2P61201 443 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 LRRC8EQ6NSJ5 796 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 RNF139Q8WU17 664 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 TMEM260Q9NX78 707 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 NMT2O60551 498 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 LMNAP02545 664 aaKnown RBP17.21■□□□□ 0.35
SSRP1-202ENST00000293880 MXD4Q14582 209 aaPredicted RBP17.21■□□□□ 0.35
SSRP1-202ENST00000293880 DSTYKQ6XUX3 929 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 ANKMY2Q8IV38 441 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 ENAHQ8N8S7 591 aaPredicted RBP17.21■□□□□ 0.35
SSRP1-202ENST00000293880 PCSK1NQ9UHG2 260 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 ADAM21Q9UKJ8 722 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 ABCB11O95342 1321 aa17.21■□□□□ 0.35
SSRP1-202ENST00000293880 ZNF335Q9H4Z2 1342 aaPredicted RBP17.21■□□□□ 0.35
SSRP1-202ENST00000293880 ERVV-2B6SEH9 535 aa17.21■□□□□ 0.34
SSRP1-202ENST00000293880 DAB1O75553 588 aa17.21■□□□□ 0.34
SSRP1-202ENST00000293880 VCAM1P19320 739 aa17.21■□□□□ 0.34
SSRP1-202ENST00000293880 CCNE1P24864 410 aa17.21■□□□□ 0.34
SSRP1-202ENST00000293880 TRIM60Q495X7 471 aa17.21■□□□□ 0.34
SSRP1-202ENST00000293880 ALKBH5Q6P6C2 394 aaKnown RBP17.21■□□□□ 0.34
SSRP1-202ENST00000293880 H0YC42 278 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 ACAD11Q709F0 780 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 ZNF185O15231 689 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 GUCY1A3Q02108 690 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 NME3Q13232 169 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 LRRC36Q1X8D7 754 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 CCDC144BQ3MJ40 725 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 ZNF772Q68DY9 489 aaPredicted RBP17.2■□□□□ 0.34
SSRP1-202ENST00000293880 OXER1Q8TDS5 423 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 IFT43Q96FT9 208 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 KLC2Q9H0B6 622 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 POLIQ9UNA4 740 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 PZPP20742 1482 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 CYP2D6P10635 497 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 ZBTB18Q99592 522 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 MMTAG2Q9BU76 263 aaKnown RBP17.2■□□□□ 0.34
SSRP1-202ENST00000293880 CNOT8Q9UFF9 292 aaKnown RBP17.2■□□□□ 0.34
SSRP1-202ENST00000293880 ASAP1Q9ULH1 1129 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.2■□□□□ 0.34
SSRP1-202ENST00000293880 PSAPP07602 524 aa17.2■□□□□ 0.34
SSRP1-202ENST00000293880 VCPP55072 806 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms