RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 PADI6Q6TGC4 694 aa29.93■■■□□ 2.38
SSU72-201ENST00000291386 KCNK18Q7Z418 384 aa29.93■■■□□ 2.38
SSU72-201ENST00000291386 ZNF410Q86VK4 478 aa29.93■■■□□ 2.38
SSU72-201ENST00000291386 PSPC1Q8WXF1 523 aaKnown RBP29.93■■■□□ 2.38
SSU72-201ENST00000291386 TMEM143Q96AN5 459 aa29.93■■■□□ 2.38
SSU72-201ENST00000291386 CDK5RAP3Q96JB5 506 aa29.93■■■□□ 2.38
SSU72-201ENST00000291386 IFIH1Q9BYX4 1025 aaKnown RBP29.93■■■□□ 2.38
SSU72-201ENST00000291386 RCOR1Q9UKL0 485 aa29.93■■■□□ 2.38
SSU72-201ENST00000291386 ABHD14A-ACY1A0A1B0GW23 586 aa29.92■■■□□ 2.38
SSU72-201ENST00000291386 EFCAB14O75071 495 aa29.92■■■□□ 2.38
SSU72-201ENST00000291386 CYP11B2P19099 503 aa29.92■■■□□ 2.38
SSU72-201ENST00000291386 MCPH1Q8NEM0 835 aa29.92■■■□□ 2.38
SSU72-201ENST00000291386 TMEM40Q8WWA1 233 aa29.92■■■□□ 2.38
SSU72-201ENST00000291386 OSMRQ99650 979 aa29.92■■■□□ 2.38
SSU72-201ENST00000291386 AGO3Q9H9G7 860 aaKnown RBP29.92■■■□□ 2.38
SSU72-201ENST00000291386 TRIOBPQ9H2D6 2365 aa29.91■■■□□ 2.38
SSU72-201ENST00000291386 RANBP2P49792 3224 aaKnown RBP29.91■■■□□ 2.38
SSU72-201ENST00000291386 USO1O60763 962 aaKnown RBP29.91■■■□□ 2.38
SSU72-201ENST00000291386 ARL2P36404 184 aa29.91■■■□□ 2.38
SSU72-201ENST00000291386 IKBKEQ14164 716 aa29.91■■■□□ 2.38
SSU72-201ENST00000291386 RHPN2Q8IUC4 686 aa29.91■■■□□ 2.38
SSU72-201ENST00000291386 SYMPKQ92797 1274 aaKnown RBP29.91■■■□□ 2.38
SSU72-201ENST00000291386 EPSTI1Q96J88 318 aa29.91■■■□□ 2.38
SSU72-201ENST00000291386 BMP2KQ9NSY1 1161 aaPredicted RBP29.91■■■□□ 2.38
SSU72-201ENST00000291386 CXXC1Q9P0U4 656 aaPredicted RBP29.91■■■□□ 2.38
SSU72-201ENST00000291386 CIZ1Q9ULV3 898 aaPredicted RBP29.91■■■□□ 2.38
SSU72-201ENST00000291386 GINS2Q9Y248 185 aa29.91■■■□□ 2.38
SSU72-201ENST00000291386 COL4A3BPQ9Y5P4 624 aa29.91■■■□□ 2.38
SSU72-201ENST00000291386 MICAL3Q7RTP6 2002 aa29.91■■■□□ 2.38
SSU72-201ENST00000291386 CUTAO60888 179 aa29.9■■■□□ 2.38
SSU72-201ENST00000291386 KRT85P78386 507 aa29.9■■■□□ 2.38
SSU72-201ENST00000291386 MXD4Q14582 209 aaPredicted RBP29.9■■■□□ 2.38
SSU72-201ENST00000291386 ZRSR1Q15695 479 aaKnown RBP29.9■■■□□ 2.38
SSU72-201ENST00000291386 HABP4Q5JVS0 413 aaKnown RBP29.9■■■□□ 2.38
SSU72-201ENST00000291386 ODR4Q5SWX8 454 aa29.9■■■□□ 2.38
SSU72-201ENST00000291386 USP49Q70CQ1 688 aa29.9■■■□□ 2.38
SSU72-201ENST00000291386 PRPF31Q8WWY3 499 aaKnown RBP29.9■■■□□ 2.38
SSU72-201ENST00000291386 NOC2LQ9Y3T9 749 aaKnown RBP29.9■■■□□ 2.38
SSU72-201ENST00000291386 TCHHQ07283 1943 aa29.9■■■□□ 2.38
SSU72-201ENST00000291386 EIF4BP23588 611 aaKnown RBP29.89■■■□□ 2.38
SSU72-201ENST00000291386 CD52P31358 61 aa29.89■■■□□ 2.38
SSU72-201ENST00000291386 SPECC1Q5M775 1068 aa29.89■■■□□ 2.38
SSU72-201ENST00000291386 NLRP7Q8WX94 980 aa29.89■■■□□ 2.38
SSU72-201ENST00000291386 PPP1R16BQ96T49 567 aa29.89■■■□□ 2.38
SSU72-201ENST00000291386 PADI3Q9ULW8 664 aa29.89■■■□□ 2.38
SSU72-201ENST00000291386 RPS6KA5O75582 802 aa29.88■■■□□ 2.37
SSU72-201ENST00000291386 DARSP14868 501 aaKnown RBP29.88■■■□□ 2.37
SSU72-201ENST00000291386 TXLNAP40222 546 aa29.88■■■□□ 2.37
SSU72-201ENST00000291386 POU5F1BQ06416 359 aa29.88■■■□□ 2.37
SSU72-201ENST00000291386 LAMTOR4Q0VGL1 99 aa29.88■■■□□ 2.37
SSU72-201ENST00000291386 PAK2Q13177 524 aa29.88■■■□□ 2.37
SSU72-201ENST00000291386 KARSQ15046 597 aaKnown RBP29.88■■■□□ 2.37
SSU72-201ENST00000291386 AXDND1Q5T1B0 1012 aaPredicted RBP29.88■■■□□ 2.37
SSU72-201ENST00000291386 SYT2Q8N9I0 419 aaPredicted RBP29.88■■■□□ 2.37
SSU72-201ENST00000291386 PLIN2Q99541 437 aa29.88■■■□□ 2.37
SSU72-201ENST00000291386 GCOM2Q9BZD3 368 aaPredicted RBP29.88■■■□□ 2.37
SSU72-201ENST00000291386 ERVK-5Q9HDB9 667 aa29.88■■■□□ 2.37
SSU72-201ENST00000291386 CCDC39Q9UFE4 941 aa29.88■■■□□ 2.37
SSU72-201ENST00000291386 A0A087WZ62 844 aa29.87■■■□□ 2.37
SSU72-201ENST00000291386 GPR182O15218 404 aa29.87■■■□□ 2.37
SSU72-201ENST00000291386 PLCG1P19174 1290 aa29.87■■■□□ 2.37
SSU72-201ENST00000291386 KSR1Q8IVT5 923 aa29.87■■■□□ 2.37
SSU72-201ENST00000291386 PHOSPHO2Q8TCD6 241 aa29.87■■■□□ 2.37
SSU72-201ENST00000291386 FDXACB1Q9BRP7 624 aaPredicted RBP29.87■■■□□ 2.37
SSU72-201ENST00000291386 FTHL17Q9BXU8 183 aa29.87■■■□□ 2.37
SSU72-201ENST00000291386 INO80BQ9C086 356 aaPredicted RBP29.87■■■□□ 2.37
SSU72-201ENST00000291386 BLOC1S4Q9NUP1 217 aa29.87■■■□□ 2.37
SSU72-201ENST00000291386 KCND2Q9NZV8 630 aa29.87■■■□□ 2.37
SSU72-201ENST00000291386 PCDHA7Q9UN72 937 aa29.87■■■□□ 2.37
SSU72-201ENST00000291386 SLC4A7Q9Y6M7 1214 aa29.87■■■□□ 2.37
SSU72-201ENST00000291386 ZBBXA8MT70 800 aa29.86■■■□□ 2.37
SSU72-201ENST00000291386 PLA2G4BP0C869 781 aa29.86■■■□□ 2.37
SSU72-201ENST00000291386 SLC12A3P55017 1021 aa29.86■■■□□ 2.37
SSU72-201ENST00000291386 WDR5P61964 334 aaKnown RBP29.86■■■□□ 2.37
SSU72-201ENST00000291386 RINT1Q6NUQ1 792 aa29.86■■■□□ 2.37
SSU72-201ENST00000291386 C1orf186Q6ZWK4 172 aa29.86■■■□□ 2.37
SSU72-201ENST00000291386 FAM228AQ86W67 206 aa29.86■■■□□ 2.37
SSU72-201ENST00000291386 LRRC15Q8TF66 581 aa29.86■■■□□ 2.37
SSU72-201ENST00000291386 POLR3FQ9H1D9 316 aaPredicted RBP29.86■■■□□ 2.37
SSU72-201ENST00000291386 IFT122Q9HBG6 1241 aa29.86■■■□□ 2.37
SSU72-201ENST00000291386 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.85■■■□□ 2.37
SSU72-201ENST00000291386 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.85■■■□□ 2.37
SSU72-201ENST00000291386 GLRA2P23416 452 aa29.85■■■□□ 2.37
SSU72-201ENST00000291386 IFNLR1Q8IU57 520 aaPredicted RBP29.85■■■□□ 2.37
SSU72-201ENST00000291386 RASSF8Q8NHQ8 419 aa29.85■■■□□ 2.37
SSU72-201ENST00000291386 ASAP3Q8TDY4 903 aa29.85■■■□□ 2.37
SSU72-201ENST00000291386 LEO1Q8WVC0 666 aaPredicted RBP29.85■■■□□ 2.37
SSU72-201ENST00000291386 ZNF668Q96K58 619 aaPredicted RBP29.85■■■□□ 2.37
SSU72-201ENST00000291386 NLRP4Q96MN2 994 aa29.85■■■□□ 2.37
SSU72-201ENST00000291386 SCLT1Q96NL6 688 aa29.85■■■□□ 2.37
SSU72-201ENST00000291386 SLC9A7Q96T83 725 aa29.85■■■□□ 2.37
SSU72-201ENST00000291386 TIPINQ9BVW5 301 aa29.85■■■□□ 2.37
SSU72-201ENST00000291386 SCAND2PQ9GZW5 306 aaPredicted RBP29.85■■■□□ 2.37
SSU72-201ENST00000291386 ST3GAL5Q9UNP4 418 aa29.85■■■□□ 2.37
SSU72-201ENST00000291386 KCNJ6P48051 423 aa29.84■■■□□ 2.37
SSU72-201ENST00000291386 TFDP1Q14186 410 aa29.84■■■□□ 2.37
SSU72-201ENST00000291386 SRGAP1Q7Z6B7 1085 aa29.84■■■□□ 2.37
SSU72-201ENST00000291386 RAD54LQ92698 747 aa29.84■■■□□ 2.37
SSU72-201ENST00000291386 SPATA32Q96LK8 384 aa29.84■■■□□ 2.37
SSU72-201ENST00000291386 NFKBIZQ9BYH8 718 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms