RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 ZNF397Q8NF99 534 aaPredicted RBP18.33■□□□□ 0.52
HIF3A-203ENST00000291300 PCYT2Q99447 389 aa18.33■□□□□ 0.52
HIF3A-203ENST00000291300 CBWD1Q9BRT8 395 aa18.33■□□□□ 0.52
HIF3A-203ENST00000291300 MAF1Q9H063 256 aa18.33■□□□□ 0.52
HIF3A-203ENST00000291300 L2HGDHQ9H9P8 463 aa18.33■□□□□ 0.52
HIF3A-203ENST00000291300 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.33■□□□□ 0.52
HIF3A-203ENST00000291300 V9GYY5 206 aaPredicted RBP18.33■□□□□ 0.52
HIF3A-203ENST00000291300 DYNC1I1O14576 645 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 WDR78Q5VTH9 848 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 ZNF710Q8N1W2 664 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 ATP6V0A1Q93050 837 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 EFCC1Q9HA90 598 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 PDLIM7Q9NR12 457 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 ZNHIT6Q9NWK9 470 aaKnown RBP18.32■□□□□ 0.52
HIF3A-203ENST00000291300 ADGRA3Q8IWK6 1321 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 IGSF9BQ9UPX0 1349 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 GSTTP1A0A1W2PQM5 241 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 GRIN3BO60391 1043 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 FARP2O94887 1054 aaPredicted RBP18.32■□□□□ 0.52
HIF3A-203ENST00000291300 ATG7O95352 703 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 TRIM49P0CI25 452 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 TRIM49CP0CI26 452 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 OSBPP22059 807 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 PSMC2P35998 433 aaKnown RBP18.32■□□□□ 0.52
HIF3A-203ENST00000291300 EIF4A3P38919 411 aaKnown RBP18.32■□□□□ 0.52
HIF3A-203ENST00000291300 NPTX2P47972 431 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 NCKAP1LP55160 1127 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 GTF2BQ00403 316 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 SNAPC2Q13487 334 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 HGSNATQ68CP4 663 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 HS2ST1Q7LGA3 356 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 CACNA2D4Q7Z3S7 1137 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 MS4A4AQ96JQ5 239 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 LACRTQ9GZZ8 138 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 CEP72Q9P209 647 aa18.32■□□□□ 0.52
HIF3A-203ENST00000291300 DNAJC25-GNG10A0A024R161 153 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 CCDC169A6NNP5 214 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 PON1P27169 355 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 MTERF2Q49AM1 385 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 MIS18BP1Q6P0N0 1132 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 GJB7Q6PEY0 223 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 STXBP4Q6ZWJ1 553 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 TMEM161BQ8NDZ6 487 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 DRC1Q96MC2 740 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 SIX2Q9NPC8 291 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 CYP26B1Q9NR63 512 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 ANKRD63C9JTQ0 380 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 URI1O94763 535 aaPredicted RBP18.31■□□□□ 0.52
HIF3A-203ENST00000291300 SLC25A27O95847 323 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 MAPTP10636 758 aaKnown RBP18.31■□□□□ 0.52
HIF3A-203ENST00000291300 ERVK-9P63128 1117 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 CDK17Q00537 523 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 ARHGAP29Q52LW3 1261 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 ZNF569Q5MCW4 686 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 MMP19Q99542 508 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 METTL14Q9HCE5 456 aaKnown RBP18.31■□□□□ 0.52
HIF3A-203ENST00000291300 MAFBQ9Y5Q3 323 aaPredicted RBP18.31■□□□□ 0.52
HIF3A-203ENST00000291300 FHOD1Q9Y613 1164 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 DUSP10Q9Y6W6 482 aa18.31■□□□□ 0.52
HIF3A-203ENST00000291300 TUBB4AP04350 444 aa18.3■□□□□ 0.52
HIF3A-203ENST00000291300 CASQ1P31415 396 aa18.3■□□□□ 0.52
HIF3A-203ENST00000291300 DLG4P78352 724 aa18.3■□□□□ 0.52
HIF3A-203ENST00000291300 CBWD6Q4V339 395 aa18.3■□□□□ 0.52
HIF3A-203ENST00000291300 CBWD3Q5JTY5 395 aa18.3■□□□□ 0.52
HIF3A-203ENST00000291300 CBWD5Q5RIA9 395 aa18.3■□□□□ 0.52
HIF3A-203ENST00000291300 OTUD6AQ7L8S5 288 aa18.3■□□□□ 0.52
HIF3A-203ENST00000291300 SLC35F6Q8N357 371 aa18.3■□□□□ 0.52
HIF3A-203ENST00000291300 IQCDQ96DY2 449 aa18.3■□□□□ 0.52
HIF3A-203ENST00000291300 ACCSQ96QU6 501 aa18.3■□□□□ 0.52
HIF3A-203ENST00000291300 RRAGCQ9HB90 399 aa18.3■□□□□ 0.52
HIF3A-203ENST00000291300 ZNF302Q9NR11 478 aa18.3■□□□□ 0.52
HIF3A-203ENST00000291300 EIF3CLB5ME19 914 aaKnown RBP18.29■□□□□ 0.52
HIF3A-203ENST00000291300 FBXO16Q8IX29 292 aaPredicted RBP18.29■□□□□ 0.52
HIF3A-203ENST00000291300 PLEKHO2Q8TD55 490 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 EIF3CQ99613 913 aaKnown RBP18.29■□□□□ 0.52
HIF3A-203ENST00000291300 GUCA1BQ9UMX6 200 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 USP20Q9Y2K6 914 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 IGKV6D-21A0A0A0MT36 114 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 BTBD19C9JJ37 291 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 EXOC3O60645 756 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 LRRN2O75325 713 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 GGPS1O95749 300 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 TFRCP02786 760 aaKnown RBP18.29■□□□□ 0.52
HIF3A-203ENST00000291300 ADSSP30520 456 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 ARID5AQ03989 594 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 EXOC3L4Q17RC7 722 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 KLHDC7AQ5VTJ3 777 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 SLC9A9Q8IVB4 645 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 BRI3BPQ8WY22 251 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 CCDC42Q96M95 316 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 CEP89Q96ST8 783 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 TIPINQ9BVW5 301 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 ST6GALNAC4Q9H4F1 302 aa18.29■□□□□ 0.52
HIF3A-203ENST00000291300 GOLGA8IPA6NC78 632 aa18.28■□□□□ 0.52
HIF3A-203ENST00000291300 GOLGA8JA6NMD2 632 aa18.28■□□□□ 0.52
HIF3A-203ENST00000291300 PDHXO00330 501 aa18.28■□□□□ 0.52
HIF3A-203ENST00000291300 CYLC1P35663 651 aaPredicted RBP18.28■□□□□ 0.52
HIF3A-203ENST00000291300 KIF11P52732 1056 aa18.28■□□□□ 0.52
HIF3A-203ENST00000291300 NCBP1Q09161 790 aaKnown RBP18.28■□□□□ 0.52
HIF3A-203ENST00000291300 ENOX2Q16206 610 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms