RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 GLIS3Q8NEA6 775 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 FIZ1Q96SL8 496 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 FGFBP2Q9BYJ0 223 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 RRN3P2A6NIE6 340 aa20.89■□□□□ 0.93
PDLIM3-202ENST00000284770 IKBKBO14920 756 aa20.89■□□□□ 0.93
PDLIM3-202ENST00000284770 MAGEB2O15479 319 aa20.89■□□□□ 0.93
PDLIM3-202ENST00000284770 C22orf31O95567 290 aa20.89■□□□□ 0.93
PDLIM3-202ENST00000284770 IGBP1P78318 339 aa20.89■□□□□ 0.93
PDLIM3-202ENST00000284770 GRIK4Q16099 956 aa20.89■□□□□ 0.93
PDLIM3-202ENST00000284770 KCNA10Q16322 511 aa20.89■□□□□ 0.93
PDLIM3-202ENST00000284770 GUF1Q8N442 669 aaKnown RBP20.89■□□□□ 0.93
PDLIM3-202ENST00000284770 TMEM143Q96AN5 459 aa20.89■□□□□ 0.93
PDLIM3-202ENST00000284770 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.89■□□□□ 0.93
PDLIM3-202ENST00000284770 POLR3FQ9H1D9 316 aaPredicted RBP20.89■□□□□ 0.93
PDLIM3-202ENST00000284770 NRCAMQ92823 1304 aa20.89■□□□□ 0.93
PDLIM3-202ENST00000284770 BECN2A8MW95 431 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 AP5Z1O43299 807 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 ASGR1P07306 291 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 SMIM10L2AP0DMW4 78 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 SMIM10L2BP0DMW5 78 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 MAPTP10636 758 aaKnown RBP20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 KLRC1P26715 233 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 ARL2P36404 184 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 CHMP4BP1P59074 171 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 LRRC41Q15345 812 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 KLHL10Q6JEL2 608 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 CXCL17Q6UXB2 119 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 ZNF720Q7Z2F6 126 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 MYOCDQ8IZQ8 938 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 DHTKD1Q96HY7 919 aaPredicted RBP20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 UNC93B1Q9H1C4 597 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 SUGCTQ9HAC7 445 aa20.88■□□□□ 0.93
PDLIM3-202ENST00000284770 PSMA7O14818 248 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 MYCNP04198 464 aaPredicted RBP20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 CASP5P51878 434 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 PEX3P56589 373 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 DMP1Q13316 513 aaPredicted RBP20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 MARCH8Q5T0T0 291 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 IER5Q5VY09 327 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 EPM2AIP1Q7L775 607 aaPredicted RBP20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 RETREG2Q8NC44 543 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 TCP11Q8WWU5 503 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 MED15Q96RN5 788 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 NTPCRQ9BSD7 190 aaKnown RBP20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 SETD4Q9NVD3 440 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 KCNG1Q9UIX4 513 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 GOLGA6L19H0YKK7 550 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 KIF20AO95235 890 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 GCNT3O95395 438 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 NMT1P30419 496 aaKnown RBP20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 SMTNP53814 917 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 PAK1Q13153 545 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 MKRN4PQ13434 485 aaPredicted RBP20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 PKN2Q16513 984 aaKnown RBP20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 EFCAB12Q6NXP0 572 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 FBXO46Q6PJ61 603 aaPredicted RBP20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 MTHFD1LQ6UB35 978 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 SLC17A8Q8NDX2 589 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 SCFD1Q8WVM8 642 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 SPIRE2Q8WWL2 714 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 BSNDQ8WZ55 320 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 IFT74Q96LB3 600 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 PAK6Q9NQU5 681 aaPredicted RBP20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 RWDD2AQ9UIY3 292 aa20.87■□□□□ 0.93
PDLIM3-202ENST00000284770 EIF3DO15371 548 aaKnown RBP eCLIP20.86■□□□□ 0.93
PDLIM3-202ENST00000284770 MYBP10242 640 aa20.86■□□□□ 0.93
PDLIM3-202ENST00000284770 NPTX2P47972 431 aa20.86■□□□□ 0.93
PDLIM3-202ENST00000284770 MYL5Q02045 173 aa20.86■□□□□ 0.93
PDLIM3-202ENST00000284770 DRP2Q13474 957 aa20.86■□□□□ 0.93
PDLIM3-202ENST00000284770 MTFR1Q15390 333 aa20.86■□□□□ 0.93
PDLIM3-202ENST00000284770 LRRC71Q8N4P6 559 aa20.86■□□□□ 0.93
PDLIM3-202ENST00000284770 METTL13Q8N6R0 699 aa20.86■□□□□ 0.93
PDLIM3-202ENST00000284770 ENOX1Q8TC92 643 aaKnown RBP20.86■□□□□ 0.93
PDLIM3-202ENST00000284770 LMBR1Q8WVP7 490 aa20.86■□□□□ 0.93
PDLIM3-202ENST00000284770 NELFBQ8WX92 580 aa20.86■□□□□ 0.93
PDLIM3-202ENST00000284770 CTNND2Q9UQB3 1225 aa20.86■□□□□ 0.93
PDLIM3-202ENST00000284770 PCDHB13Q9Y5F0 798 aa20.86■□□□□ 0.93
PDLIM3-202ENST00000284770 SMTNL1A8MU46 457 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 GLRA2P23416 452 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 DNM2P50570 870 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 NCKAP1LP55160 1127 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 STXBP4Q6ZWJ1 553 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 LINC01465Q8N7H1 131 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 C7orf31Q8N865 590 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 ARRDC4Q8NCT1 418 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 ZNF507Q8TCN5 953 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 ASAP3Q8TDY4 903 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 ANP32BQ92688 251 aaKnown RBP20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 ZBTB10Q96DT7 871 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 TSEN34Q9BSV6 310 aaKnown RBP20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 STRA6Q9BX79 667 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 HSD3B7Q9H2F3 369 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 ST6GALNAC4Q9H4F1 302 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 CCDC169A6NNP5 214 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 K7ENM7 598 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 CABYRO75952 493 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 CCL5P13501 91 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 ADAM17P78536 824 aa20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 MXD4Q14582 209 aaPredicted RBP20.85■□□□□ 0.93
PDLIM3-202ENST00000284770 PPP2R5AQ15172 486 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms