RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 BECN1Q14457 450 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 DLGAP5Q15398 846 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 TRIM61Q5EBN2 209 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 CC2D1BQ5T0F9 858 aaKnown RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 KLHL6Q8WZ60 621 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 POFUT1Q9H488 388 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 OSGEPQ9NPF4 335 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 CCM2LQ9NUG4 571 aaPredicted RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 ADD3Q9UEY8 706 aaKnown RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 ABCF2Q9UG63 623 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 FEZ2Q9UHY8 353 aaPredicted RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 HIF3AQ9Y2N7 669 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 SOX1O00570 391 aaPredicted RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 AXIN1O15169 862 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 GSPT1P15170 499 aaKnown RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 SLC7A1P30825 629 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 IL12RB1P42701 662 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 MATR3P43243 847 aaKnown RBP eCLIP3.1□□□□□ -1.91
CHD1-201ENST00000284049 RNF144AP50876 292 aaPredicted RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 RPL11P62913 178 aaKnown RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 SATB1Q01826 763 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 ATPAF1Q5TC12 328 aaPredicted RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 ARHGAP36Q6ZRI8 547 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 CHST15Q7LFX5 561 aaPredicted RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 TTC30AQ86WT1 665 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 C2CD5Q86YS7 1000 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 ARHGEF39Q8N4T4 335 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 RUFY2Q8WXA3 655 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 PPP1R16BQ96T49 567 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 LBHD1Q9BQE6 289 aaPredicted RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 ADI1Q9BV57 179 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 DCP1AQ9NPI6 582 aaPredicted RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 ARHGAP28Q9P2N2 729 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 JAG2Q9Y219 1238 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 CRYL1Q9Y2S2 319 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 USP54Q70EL1 1684 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 PRSS47A8MTI9 375 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 SCDO00767 359 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 HNRNPCL1O60812 293 aaKnown RBP3.09□□□□□ -1.91
CHD1-201ENST00000284049 SLU7O95391 586 aaKnown RBP3.09□□□□□ -1.91
CHD1-201ENST00000284049 ALDH2P05091 517 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 CHMP24386 653 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 LAMC2Q13753 1193 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 SF1Q15637 639 aaKnown RBP3.09□□□□□ -1.91
CHD1-201ENST00000284049 TMEM177Q53S58 311 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 FRMD7Q6ZUT3 714 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 CHD1LQ86WJ1 897 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 ANKRD20A12PQ8NF67 263 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 CEP70Q8NHQ1 597 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 BRIX1Q8TDN6 353 aaKnown RBP3.09□□□□□ -1.91
CHD1-201ENST00000284049 DCAF11Q8TEB1 546 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 LRRC46Q96FV0 321 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 CDHR1Q96JP9 859 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 HS3ST6Q96QI5 342 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 RMDN3Q96TC7 470 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 STK31Q9BXU1 1019 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 BRD8Q9H0E9 1235 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 CRISPLD1Q9H336 500 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 TCF7L1Q9HCS4 588 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 GFOD1Q9NXC2 390 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 H2AFY2Q9P0M6 372 aaPredicted RBP3.09□□□□□ -1.91
CHD1-201ENST00000284049 ZSWIM5Q9P217 1185 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 ATXN7L1Q9ULK2 861 aaPredicted RBP3.09□□□□□ -1.91
CHD1-201ENST00000284049 SPO11Q9Y5K1 396 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 TACC3Q9Y6A5 838 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 ATP7AQ04656 1500 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 PODXLO00592 558 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 KCNK3O14649 394 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 P4HA2O15460 535 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 IL18RAPO95256 599 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 TPM2P07951 284 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 KITP10721 976 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 ZBED6P86452 979 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 ZNF252P-AS1Q0IIN9 211 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 TMEM201Q5SNT2 666 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 KLHDC7AQ5VTJ3 777 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 LETMD1Q6P1Q0 360 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 RNF214Q8ND24 703 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 GIMAP7Q8NHV1 300 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 GSX2Q9BZM3 304 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 PADI4Q9UM07 663 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 COL17A1Q9UMD9 1497 aaPredicted RBP3.09□□□□□ -1.91
CHD1-201ENST00000284049 TBC1D4O60343 1298 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 CLEC2LP0C7M8 214 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 AMPHP49418 695 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 RPP30P78346 268 aaKnown RBP3.09□□□□□ -1.91
CHD1-201ENST00000284049 NMIQ13287 307 aaPredicted RBP3.09□□□□□ -1.91
CHD1-201ENST00000284049 MAMLD1Q13495 774 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 SPARCL1Q14515 664 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 ASIC2Q16515 512 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.09□□□□□ -1.91
CHD1-201ENST00000284049 PRSS53Q2L4Q9 553 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 PRAMEF9Q5VWM5 478 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 IZUMO3Q5VZ72 239 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 RNF44Q7L0R7 432 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 OSTM1Q86WC4 334 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 KIAA1191Q96A73 305 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 RGMAQ96B86 450 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 ARL8AQ96BM9 186 aa3.09□□□□□ -1.91
CHD1-201ENST00000284049 COA7Q96BR5 231 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms