RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 PARD6BQ9BYG5 372 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 INPP5FQ9Y2H2 1132 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 TACC3Q9Y6A5 838 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 DIP2BQ9P265 1576 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 USP32Q8NFA0 1604 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 ZRANB2O95218 330 aaKnown RBP eCLIP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 FGGP02679 453 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 FDPSP14324 419 aaKnown RBP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 GARSP41250 739 aaKnown RBP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 GMPSP49915 693 aaPredicted RBP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 RASSF2P50749 326 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 STAT5BP51692 787 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 SLC10A5Q5PT55 438 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 TOGARAM2Q6ZUX3 1019 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 MRPL4Q9BYD3 311 aaKnown RBP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 TMEM39BQ9GZU3 492 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 INTS9Q9NV88 658 aaKnown RBP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 IPO11Q9UI26 975 aaKnown RBP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 SCAF8Q9UPN6 1271 aaKnown RBP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 ATP8B3O60423 1300 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 CEP170BQ9Y4F5 1589 aaPredicted RBP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 CSPG5O95196 566 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 TXNP10599 105 aaKnown RBP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 PSMA2P25787 234 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 DRAP1Q14919 205 aaPredicted RBP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 TRIP13Q15645 432 aaPredicted RBP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 ARHGEF18Q6ZSZ5 1173 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 USP49Q70CQ1 688 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 TUFT1Q9NNX1 390 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 NR3C2P08235 984 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 SRGAP2BP0DMP2 458 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 DDX23Q9BUQ8 820 aaKnown RBP12.11□□□□□ -0.47
USP6NL-201ENST00000277575 DEFB129Q9H1M3 183 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 PDS5AQ29RF7 1337 aaKnown RBP12.11□□□□□ -0.47
USP6NL-201ENST00000277575 KDM6AO15550 1401 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-201ENST00000277575 MIF4GDA9UHW6 222 aaKnown RBP12.11□□□□□ -0.47
USP6NL-201ENST00000277575 ATP8B1O43520 1251 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 HUS1O60921 280 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 PALMO75781 387 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 CPP00450 1065 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 GSTA1P08263 222 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 GSTA2P09210 222 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 NMT1P30419 496 aaKnown RBP12.11□□□□□ -0.47
USP6NL-201ENST00000277575 ELF1P32519 619 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 GPC5P78333 572 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 TROAPQ12815 778 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 PLCB4Q15147 1175 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 PASD1Q8IV76 773 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 C11orf70Q9BRQ4 267 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 CCDC188H7C350 402 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 ECE1P42892 770 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 DR1Q01658 176 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 CCDC144BQ3MJ40 725 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 PPP6R3Q5H9R7 873 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-201ENST00000277575 ANKRD40Q6AI12 368 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 CCHCR1Q8TD31 782 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 LRRC8CQ8TDW0 803 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 HPS3Q969F9 1004 aa12.11□□□□□ -0.47
USP6NL-201ENST00000277575 ZC3H13Q5T200 1668 aaKnown RBP12.11□□□□□ -0.47
USP6NL-201ENST00000277575 STXBP3O00186 592 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 ZBED1O96006 694 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 ANXA13P27216 316 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 YWHABP31946 246 aaKnown RBP12.1□□□□□ -0.47
USP6NL-201ENST00000277575 GPC3P51654 580 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 HDLBPQ00341 1268 aaKnown RBP12.1□□□□□ -0.47
USP6NL-201ENST00000277575 SLC7A5Q01650 507 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 BBS9Q3SYG4 887 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 ZWILCHQ9H900 591 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 JMJD4Q9H9V9 463 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 MEGF6O75095 1541 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 PDXKO00764 312 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 TBX3O15119 743 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 GGPS1O95749 300 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 GFPT1Q06210 699 aaPredicted RBP12.1□□□□□ -0.47
USP6NL-201ENST00000277575 MUM1L1Q5H9M0 696 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 KCNV1Q6PIU1 500 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 SAMD7Q7Z3H4 446 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 BEST2Q8NFU1 509 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 FMO2Q99518 471 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 MAP3K14Q99558 947 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 RBAKQ9NYW8 714 aaPredicted RBP12.1□□□□□ -0.47
USP6NL-201ENST00000277575 AGO2Q9UKV8 859 aaKnown RBP12.1□□□□□ -0.47
USP6NL-201ENST00000277575 CNTNAP5Q8WYK1 1306 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 XPAP23025 273 aaPredicted RBP12.1□□□□□ -0.47
USP6NL-201ENST00000277575 XKR3Q5GH77 459 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 RNF149Q8NC42 400 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 MYOZ2Q9NPC6 264 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 TNPO2O14787 897 aaKnown RBP12.1□□□□□ -0.47
USP6NL-201ENST00000277575 TBXAS1P24557 533 aaPredicted RBP12.1□□□□□ -0.47
USP6NL-201ENST00000277575 SLMAPQ14BN4 828 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 EZH2Q15910 746 aaKnown RBP12.1□□□□□ -0.47
USP6NL-201ENST00000277575 ARL13BQ3SXY8 428 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 NXNQ6DKJ4 435 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 RPUSD2Q8IZ73 545 aaKnown RBP12.1□□□□□ -0.47
USP6NL-201ENST00000277575 PDIK1LQ8N165 341 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 GCOM2Q9BZD3 368 aaPredicted RBP12.1□□□□□ -0.47
USP6NL-201ENST00000277575 ZMYND12Q9H0C1 365 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 INTS2Q9H0H0 1204 aaKnown RBP12.1□□□□□ -0.47
USP6NL-201ENST00000277575 EMSYQ7Z589 1322 aa12.1□□□□□ -0.47
USP6NL-201ENST00000277575 NCOA3Q9Y6Q9 1424 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms