RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 LMTK3Q96Q04 1460 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 STRCQ7RTU9 1775 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 ZNF335Q9H4Z2 1342 aaPredicted RBP9.93□□□□□ -0.82
PDGFC-201ENST00000274071 TBX10O75333 385 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 CTDSPL2Q05D32 466 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 KRT72Q14CN4 511 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 ZNF394Q53GI3 561 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 RRAGBQ5VZM2 374 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 FNDC8Q8TC99 324 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 ZMAT2Q96NC0 199 aaKnown RBP9.93□□□□□ -0.82
PDGFC-201ENST00000274071 KRT82Q9NSB4 513 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 DDX18Q9NVP1 670 aaKnown RBP9.93□□□□□ -0.82
PDGFC-201ENST00000274071 KLHL14Q9P2G3 628 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 DBF4Q9UBU7 674 aaPredicted RBP9.93□□□□□ -0.82
PDGFC-201ENST00000274071 FADS3Q9Y5Q0 445 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 COL18A1P39060 1754 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 PRAMEF22A3QJZ6 481 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 CAPN9O14815 690 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 ATP5HO75947 161 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 SLC34A1Q06495 639 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 AP1B1Q10567 949 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 DCTN2Q13561 401 aaKnown RBP9.93□□□□□ -0.82
PDGFC-201ENST00000274071 VWA3BQ502W6 1294 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 RNF43Q68DV7 783 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 TYW1BQ6NUM6 668 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 POTEEQ6S8J3 1075 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 HS2ST1Q7LGA3 356 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 ZNF579Q8NAF0 562 aaKnown RBP9.93□□□□□ -0.82
PDGFC-201ENST00000274071 UHMK1Q8TAS1 419 aaKnown RBP9.93□□□□□ -0.82
PDGFC-201ENST00000274071 SREK1Q8WXA9 508 aaKnown RBP9.93□□□□□ -0.82
PDGFC-201ENST00000274071 INPP5DQ92835 1189 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 BHMTQ93088 406 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 MYLK2Q9H1R3 596 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 AZI2Q9H6S1 392 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 PTTG2Q9NZH5 202 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 ARHGAP20Q9P2F6 1191 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 TSC22D4Q9Y3Q8 395 aa9.93□□□□□ -0.82
PDGFC-201ENST00000274071 NAT2P11245 290 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 PHKG2P15735 406 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 TCF7P36402 384 aaPredicted RBP9.92□□□□□ -0.82
PDGFC-201ENST00000274071 GRIA2P42262 883 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 PAK1Q13153 545 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 PUS10Q3MIT2 529 aaKnown RBP9.92□□□□□ -0.82
PDGFC-201ENST00000274071 C6orf183Q5T699 404 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 FAAH2Q6GMR7 532 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 SATL1Q86VE3 508 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 VSIG1Q86XK7 387 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 PPFIBP2Q8ND30 876 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 ANKK1Q8NFD2 765 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 CFAP61Q8NHU2 1237 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 NOX5Q96PH1 765 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 DUSP9Q99956 384 aaKnown RBP9.92□□□□□ -0.82
PDGFC-201ENST00000274071 KIAA1683Q9H0B3 1180 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 CSRNP2Q9H175 543 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.92□□□□□ -0.82
PDGFC-201ENST00000274071 IL1RAPL1Q9NZN1 696 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 PACSIN2Q9UNF0 486 aaPredicted RBP9.92□□□□□ -0.82
PDGFC-201ENST00000274071 BCL9LQ86UU0 1499 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 RGS16O15492 202 aaPredicted RBP9.92□□□□□ -0.82
PDGFC-201ENST00000274071 PDE5AO76074 875 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 OXSR1O95747 527 aaPredicted RBP9.92□□□□□ -0.82
PDGFC-201ENST00000274071 T-ENOLP0DO92 83 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 RGS2P41220 211 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 PIP4K2AP48426 406 aaPredicted RBP9.92□□□□□ -0.82
PDGFC-201ENST00000274071 KIF11P52732 1056 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 KIF22Q14807 665 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 PDCD4Q53EL6 469 aaKnown RBP9.92□□□□□ -0.82
PDGFC-201ENST00000274071 C4orf50Q6ZRC1 276 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 CXorf38Q8TB03 319 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 STAMQ92783 540 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 NACC2Q96BF6 587 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 EPB41L4BQ9H329 900 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 RPL26L1Q9UNX3 145 aaKnown RBP9.92□□□□□ -0.82
PDGFC-201ENST00000274071 HEG1Q9ULI3 1381 aa9.92□□□□□ -0.82
PDGFC-201ENST00000274071 MAP3K7O43318 606 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 TIMM44O43615 452 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 KRT36O76013 467 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 FTCDO95954 541 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 GTF2H1P32780 548 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 MAGEA1P43355 309 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 RXRGP48443 463 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 CCR3P51677 355 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 RELAQ04206 551 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 INAQ16352 499 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 CGB2Q6NT52 195 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 TMEM214Q6NUQ4 689 aaKnown RBP9.91□□□□□ -0.82
PDGFC-201ENST00000274071 RFWD3Q6PCD5 774 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 IFNL2Q8IZJ0 200 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.91□□□□□ -0.82
PDGFC-201ENST00000274071 DGCR14Q96DF8 476 aaKnown RBP9.91□□□□□ -0.82
PDGFC-201ENST00000274071 NAP1L3Q99457 506 aaPredicted RBP9.91□□□□□ -0.82
PDGFC-201ENST00000274071 TPK1Q9H3S4 243 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 SLC52A2Q9HAB3 445 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 ATAD3AQ9NVI7 634 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 CCDC169A6NNP5 214 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 FBP2O00757 339 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 LCA5LO95447 670 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 SRGNP10124 158 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 PROSER3Q2NL68 480 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 CCDC153Q494R4 210 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms