RNA–Protein interactions for RNA: ENST00000265724.7

ABCB1-201, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-201ENST00000265724 TC2NQ8N9U0 490 aa10.59□□□□□ -0.71
ABCB1-201ENST00000265724 ATG4CQ96DT6 458 aa10.59□□□□□ -0.71
ABCB1-201ENST00000265724 FAM193BQ96PV7 902 aaPredicted RBP10.59□□□□□ -0.71
ABCB1-201ENST00000265724 MMP19Q99542 508 aa10.59□□□□□ -0.71
ABCB1-201ENST00000265724 SNX25Q9H3E2 840 aa10.59□□□□□ -0.71
ABCB1-201ENST00000265724 HDAC6Q9UBN7 1215 aa10.59□□□□□ -0.71
ABCB1-201ENST00000265724 ATP8A1Q9Y2Q0 1164 aa10.59□□□□□ -0.71
ABCB1-201ENST00000265724 ANO9A1A5B4 782 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 MED7O43513 233 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 ABL1P00519 1130 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 FGGP02679 453 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 MYO1EQ12965 1108 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 NFX1Q12986 1120 aaKnown RBP10.58□□□□□ -0.72
ABCB1-201ENST00000265724 EARS2Q5JPH6 523 aaKnown RBP10.58□□□□□ -0.72
ABCB1-201ENST00000265724 KRT39Q6A163 491 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 CNOT8Q9UFF9 292 aaKnown RBP10.58□□□□□ -0.72
ABCB1-201ENST00000265724 HACL1Q9UJ83 578 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 ABT1Q9ULW3 272 aaKnown RBP10.58□□□□□ -0.72
ABCB1-201ENST00000265724 NFAT5O94916 1531 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 KRT1P04264 644 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 MYBP10242 640 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 CAP2P40123 477 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 DYNLT1P63172 113 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 OR6B2Q6IFH4 312 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 TMEM270Q6UE05 265 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 RFX6Q8HWS3 928 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 GLYCTKQ8IVS8 523 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 ELOA2Q8IYF1 753 aaPredicted RBP10.58□□□□□ -0.72
ABCB1-201ENST00000265724 RPUSD2Q8IZ73 545 aaKnown RBP10.58□□□□□ -0.72
ABCB1-201ENST00000265724 HAUS1Q96CS2 278 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 HEXIM2Q96MH2 286 aaKnown RBP10.58□□□□□ -0.72
ABCB1-201ENST00000265724 SPATA33Q96N06 139 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 FUCA2Q9BTY2 467 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 EDEM3Q9BZQ6 932 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 ADAM22Q9P0K1 906 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 LRRD1A4D1F6 860 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 A6NJR5 290 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 SGK1O00141 431 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 CTNND1O60716 968 aaKnown RBP10.58□□□□□ -0.72
ABCB1-201ENST00000265724 HSPA6P17066 643 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 RPS12P25398 132 aaKnown RBP10.58□□□□□ -0.72
ABCB1-201ENST00000265724 PPP1R2P3Q6NXS1 205 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 RBM43Q6ZSC3 357 aaKnown RBP10.58□□□□□ -0.72
ABCB1-201ENST00000265724 CATSPER3Q86XQ3 398 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 PASD1Q8IV76 773 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 P3H4Q92791 437 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 MXRA8Q9BRK3 442 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 CALN1Q9BXU9 219 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 HOMER3Q9NSC5 361 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 ANAPC7Q9UJX3 599 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 ODF2LQ9ULJ1 636 aa10.58□□□□□ -0.72
ABCB1-201ENST00000265724 NCK2O43639 380 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 ECEL1O95672 775 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 HOXA10P31260 410 aaPredicted RBP10.57□□□□□ -0.72
ABCB1-201ENST00000265724 GBP1P32455 592 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 STX2P32856 288 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 GRIK5Q16478 980 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 ZC2HC1CQ53FD0 456 aaPredicted RBP10.57□□□□□ -0.72
ABCB1-201ENST00000265724 NME8Q8N427 588 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 BBOF1Q8ND07 529 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 EHD4Q9H223 541 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 DDX4Q9NQI0 724 aaKnown RBP10.57□□□□□ -0.72
ABCB1-201ENST00000265724 STAT5BP51692 787 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 RPS6P62753 249 aaKnown RBP10.57□□□□□ -0.72
ABCB1-201ENST00000265724 ZSCAN26Q16670 478 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 FYB2Q5VWT5 728 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 NFRKBQ6P4R8 1299 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 ILDR1Q86SU0 546 aaPredicted RBP10.57□□□□□ -0.72
ABCB1-201ENST00000265724 ERICH1Q86X53 443 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 RUNDC3BQ96NL0 473 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 CAPS2Q9BXY5 557 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 EPC1Q9H2F5 836 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 PPFIA4O75335 1185 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 MAN1A1P33908 653 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 SHMT1P34896 483 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 PHKA2P46019 1235 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 GPC5P78333 572 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 APBA1Q02410 837 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 LMNB2Q03252 620 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 CXCL9Q07325 125 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 DHX9Q08211 1270 aaKnown RBP10.57□□□□□ -0.72
ABCB1-201ENST00000265724 GRB10Q13322 594 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 CASP8Q14790 479 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 RNF10Q8N5U6 811 aaKnown RBP10.57□□□□□ -0.72
ABCB1-201ENST00000265724 NSMCE1Q8WV22 266 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 RIOX1Q9H6W3 641 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 KCNH7Q9NS40 1196 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 LRRC4BQ9NT99 713 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 FMN2Q9NZ56 1722 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 MSH4O15457 936 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 BUB1BO60566 1050 aaPredicted RBP10.57□□□□□ -0.72
ABCB1-201ENST00000265724 GGPS1O95749 300 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 GYPCP04921 128 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 CD44P16070 742 aaKnown RBP10.57□□□□□ -0.72
ABCB1-201ENST00000265724 RWDD2BP57060 319 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 PLA2G4FQ68DD2 849 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 LMBRD2Q68DH5 695 aaPredicted RBP10.57□□□□□ -0.72
ABCB1-201ENST00000265724 RAD9BQ6WBX8 426 aa10.57□□□□□ -0.72
ABCB1-201ENST00000265724 FASTKD5Q7L8L6 764 aaKnown RBP10.57□□□□□ -0.72
ABCB1-201ENST00000265724 BCAS4Q8TDM0 211 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms