RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 C1orf112Q9NSG2 853 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 IL1R1P14778 569 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 DPEP1P16444 411 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 FXR2P51116 673 aaKnown RBP eCLIP21.44■■□□□ 1.02
CSPG5-201ENST00000264723 PRELPP51888 382 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 TRADDQ15628 312 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 RNF146Q9NTX7 359 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 PSD3Q9NYI0 1048 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 LMO7Q8WWI1 1683 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 SSU72P8A0A1W2PR75 194 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 MXI1P50539 228 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 GALCP54803 685 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 GKAP1Q5VSY0 366 aaPredicted RBP21.44■■□□□ 1.02
CSPG5-201ENST00000264723 ANKS1AQ92625 1134 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 PBKQ96KB5 322 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 RNPC3Q96LT9 517 aaKnown RBP21.44■■□□□ 1.02
CSPG5-201ENST00000264723 TAF1DQ9H5J8 278 aaPredicted RBP21.44■■□□□ 1.02
CSPG5-201ENST00000264723 LMNB1P20700 586 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 HMGCS2P54868 508 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 DR1Q01658 176 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 KLHDC7AQ5VTJ3 777 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 ZNF365Q70YC5 407 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 SLC7A3Q8WY07 619 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 ACCSQ96QU6 501 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 CLTAP09496 248 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 CCDC38Q502W7 563 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 MMGT1Q8N4V1 131 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 SCFD1Q8WVM8 642 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 TBC1D31Q96DN5 1066 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 AGBL1Q96MI9 1066 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 FGFBP2Q9BYJ0 223 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 ZNRF3Q9ULT6 936 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 A0A1W2PQJ5 194 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 IFNB1P01574 187 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 SSTR3P32745 418 aaPredicted RBP21.43■■□□□ 1.02
CSPG5-201ENST00000264723 CASKIN2Q8WXE0 1202 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 STK38LQ9Y2H1 464 aa21.43■■□□□ 1.02
CSPG5-201ENST00000264723 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.43■■□□□ 1.02
CSPG5-201ENST00000264723 SYF2O95926 243 aaKnown RBP21.42■■□□□ 1.02
CSPG5-201ENST00000264723 MEA1Q16626 185 aa21.42■■□□□ 1.02
CSPG5-201ENST00000264723 KAZNQ674X7 775 aa21.42■■□□□ 1.02
CSPG5-201ENST00000264723 THOC1Q96FV9 657 aaKnown RBP21.42■■□□□ 1.02
CSPG5-201ENST00000264723 ACSL3O95573 720 aa21.42■■□□□ 1.02
CSPG5-201ENST00000264723 MTMR2Q13614 643 aa21.42■■□□□ 1.02
CSPG5-201ENST00000264723 UAP1Q16222 522 aaPredicted RBP21.42■■□□□ 1.02
CSPG5-201ENST00000264723 SHROOM1Q2M3G4 852 aaPredicted RBP21.42■■□□□ 1.02
CSPG5-201ENST00000264723 ZNF653Q96CK0 615 aa21.42■■□□□ 1.02
CSPG5-201ENST00000264723 JPH2Q9BR39 696 aaPredicted RBP21.42■■□□□ 1.02
CSPG5-201ENST00000264723 ZBTB39O15060 712 aa21.42■■□□□ 1.02
CSPG5-201ENST00000264723 KCNA1Q09470 495 aa21.42■■□□□ 1.02
CSPG5-201ENST00000264723 NAB2Q15742 525 aa21.42■■□□□ 1.02
CSPG5-201ENST00000264723 ELMO3Q96BJ8 720 aa21.42■■□□□ 1.02
CSPG5-201ENST00000264723 IKZF4Q9H2S9 585 aa21.42■■□□□ 1.02
CSPG5-201ENST00000264723 A6NNZ2 444 aa21.41■■□□□ 1.02
CSPG5-201ENST00000264723 INO80B-WBP1J3KQ70 363 aa21.41■■□□□ 1.02
CSPG5-201ENST00000264723 ECM1Q16610 540 aa21.41■■□□□ 1.02
CSPG5-201ENST00000264723 TUBB8Q3ZCM7 444 aa21.41■■□□□ 1.02
CSPG5-201ENST00000264723 INO80BQ9C086 356 aaPredicted RBP21.41■■□□□ 1.02
CSPG5-201ENST00000264723 NSRP1Q9H0G5 558 aaKnown RBP21.41■■□□□ 1.02
CSPG5-201ENST00000264723 AGTPBP1Q9UPW5 1226 aa21.41■■□□□ 1.02
CSPG5-201ENST00000264723 MYO3BQ8WXR4 1341 aa21.41■■□□□ 1.02
CSPG5-201ENST00000264723 EVI5O60447 810 aa21.41■■□□□ 1.02
CSPG5-201ENST00000264723 SHMT1P34896 483 aa21.41■■□□□ 1.02
CSPG5-201ENST00000264723 SLC15A2Q16348 729 aa21.41■■□□□ 1.02
CSPG5-201ENST00000264723 GLE1Q53GS7 698 aaKnown RBP21.41■■□□□ 1.02
CSPG5-201ENST00000264723 RSBN1LQ6PCB5 846 aaPredicted RBP21.41■■□□□ 1.02
CSPG5-201ENST00000264723 CERS5Q8N5B7 392 aa21.41■■□□□ 1.02
CSPG5-201ENST00000264723 TACO1Q9BSH4 297 aaKnown RBP21.41■■□□□ 1.02
CSPG5-201ENST00000264723 GGT7Q9UJ14 662 aa21.41■■□□□ 1.02
CSPG5-201ENST00000264723 EIF3HO15372 352 aaKnown RBP eCLIP21.41■■□□□ 1.02
CSPG5-201ENST00000264723 NT5C1BQ96P26 610 aa21.41■■□□□ 1.02
CSPG5-201ENST00000264723 INTS9Q9NV88 658 aaKnown RBP21.41■■□□□ 1.02
CSPG5-201ENST00000264723 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.41■■□□□ 1.02
CSPG5-201ENST00000264723 RGPD5Q99666 1765 aa21.41■■□□□ 1.02
CSPG5-201ENST00000264723 ADCY8P40145 1251 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 RHBDL3P58872 404 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 GPR162Q16538 588 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 LIN9Q5TKA1 542 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 TCP11Q8WWU5 503 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 TYW1Q9NV66 732 aaKnown RBP21.4■■□□□ 1.02
CSPG5-201ENST00000264723 SIK3Q9Y2K2 1263 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 SRGAP2CP0DJJ0 459 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 SLC35G1Q2M3R5 365 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 FAM133BQ5BKY9 247 aaKnown RBP21.4■■□□□ 1.02
CSPG5-201ENST00000264723 SAAL1Q96ER3 474 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 ATP6V1G3Q96LB4 118 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 TMEM51Q9NW97 253 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 SALL4Q9UJQ4 1053 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 FEM1BQ9UK73 627 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 ITGA4P13612 1032 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 PDE6CP51160 858 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 CASP5P51878 434 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 SUPT20HL1Q3ZLR7 823 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 ZNF571Q7Z3V5 609 aaPredicted RBP21.4■■□□□ 1.02
CSPG5-201ENST00000264723 ZBTB33Q86T24 672 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.4■■□□□ 1.02
CSPG5-201ENST00000264723 ATMINO43313 823 aaPredicted RBP21.4■■□□□ 1.02
CSPG5-201ENST00000264723 FTLP02792 175 aaPredicted RBP21.4■■□□□ 1.02
CSPG5-201ENST00000264723 AMIGO3Q86WK7 504 aa21.4■■□□□ 1.02
CSPG5-201ENST00000264723 MICALL2Q8IY33 904 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms