RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 OXCT2Q9BYC2 517 aaPredicted RBP17.59■□□□□ 0.41
USP13-201ENST00000263966 CNOT10Q9H9A5 744 aaKnown RBP17.59■□□□□ 0.41
USP13-201ENST00000263966 SH3BP1Q9Y3L3 701 aa17.59■□□□□ 0.41
USP13-201ENST00000263966 ZFXP17010 805 aaPredicted RBP17.59■□□□□ 0.41
USP13-201ENST00000263966 MPP6Q9NZW5 540 aa17.59■□□□□ 0.41
USP13-201ENST00000263966 KIAA1468Q9P260 1216 aa17.59■□□□□ 0.41
USP13-201ENST00000263966 GPC3P51654 580 aa17.58■□□□□ 0.41
USP13-201ENST00000263966 SPACA6W5XKT8 324 aa17.58■□□□□ 0.41
USP13-201ENST00000263966 GRIN3BO60391 1043 aa17.58■□□□□ 0.41
USP13-201ENST00000263966 ANO4Q32M45 955 aa17.58■□□□□ 0.41
USP13-201ENST00000263966 PPP6R3Q5H9R7 873 aaPredicted RBP17.58■□□□□ 0.41
USP13-201ENST00000263966 SLC27A3Q5K4L6 730 aa17.58■□□□□ 0.41
USP13-201ENST00000263966 NUDCD3Q8IVD9 361 aa17.58■□□□□ 0.41
USP13-201ENST00000263966 HAUS4Q9H6D7 363 aa17.58■□□□□ 0.41
USP13-201ENST00000263966 KRCC1Q9NPI7 259 aaPredicted RBP17.58■□□□□ 0.41
USP13-201ENST00000263966 GTSE1Q9NYZ3 720 aa17.58■□□□□ 0.41
USP13-201ENST00000263966 CFLARO15519 480 aa17.58■□□□□ 0.4
USP13-201ENST00000263966 PTPROQ16827 1216 aa17.58■□□□□ 0.4
USP13-201ENST00000263966 USP17L2Q6R6M4 530 aa17.58■□□□□ 0.4
USP13-201ENST00000263966 PGBD4Q96DM1 585 aa17.58■□□□□ 0.4
USP13-201ENST00000263966 PSD3Q9NYI0 1048 aa17.58■□□□□ 0.4
USP13-201ENST00000263966 FAM32AQ9Y421 112 aaKnown RBP17.58■□□□□ 0.4
USP13-201ENST00000263966 TEX28O15482 410 aa17.58■□□□□ 0.4
USP13-201ENST00000263966 HDAC4P56524 1084 aa17.58■□□□□ 0.4
USP13-201ENST00000263966 RBM6P78332 1123 aaKnown RBP17.58■□□□□ 0.4
USP13-201ENST00000263966 ACTR5Q9H9F9 607 aaPredicted RBP17.58■□□□□ 0.4
USP13-201ENST00000263966 SLC25A13Q9UJS0 675 aa17.58■□□□□ 0.4
USP13-201ENST00000263966 ATP1A1P05023 1023 aaKnown RBP17.58■□□□□ 0.4
USP13-201ENST00000263966 USPL1Q5W0Q7 1092 aa17.58■□□□□ 0.4
USP13-201ENST00000263966 ADCK2Q7Z695 626 aa17.58■□□□□ 0.4
USP13-201ENST00000263966 TUBGCP2Q9BSJ2 902 aa17.58■□□□□ 0.4
USP13-201ENST00000263966 A0A1W2PP64 1363 aa17.58■□□□□ 0.4
USP13-201ENST00000263966 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.4
USP13-201ENST00000263966 SUPT3HO75486 399 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 TMEM179Q6ZVK1 233 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 SPATS2LQ9NUQ6 558 aaKnown RBP17.57■□□□□ 0.4
USP13-201ENST00000263966 PGRMC1O00264 195 aaKnown RBP17.57■□□□□ 0.4
USP13-201ENST00000263966 PIK3R2O00459 728 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 GUCY2DQ02846 1103 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 ASAP3Q8TDY4 903 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 CBX8Q9HC52 389 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 SCUBE2Q9NQ36 999 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 PCDHB7Q9Y5E2 793 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 ERBB4Q15303 1308 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 PREPLQ4J6C6 727 aaPredicted RBP17.57■□□□□ 0.4
USP13-201ENST00000263966 EFHC2Q5JST6 749 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 SPATA2LQ8IUW3 424 aaPredicted RBP17.57■□□□□ 0.4
USP13-201ENST00000263966 SUCLG2Q96I99 432 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 FOXP1Q9H334 677 aaPredicted RBP17.57■□□□□ 0.4
USP13-201ENST00000263966 UNC45AQ9H3U1 944 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 NDUFB5O43674 189 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 EFTUD2Q15029 972 aaKnown RBP eCLIP17.57■□□□□ 0.41e-6■■■□□ 14.7
USP13-201ENST00000263966 RMDN1Q96DB5 314 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 RMDN3Q96TC7 470 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 RNF181Q9P0P0 153 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 IL6STP40189 918 aaPredicted RBP17.57■□□□□ 0.4
USP13-201ENST00000263966 HSD17B4P51659 736 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 AMPD2Q01433 879 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 ZHX2Q9Y6X8 837 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 PCCAP05165 728 aaPredicted RBP17.57■□□□□ 0.4
USP13-201ENST00000263966 SNCBQ16143 134 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 TBC1D10BQ4KMP7 808 aaPredicted RBP17.57■□□□□ 0.4
USP13-201ENST00000263966 RBM41Q96IZ5 413 aaKnown RBP17.57■□□□□ 0.4
USP13-201ENST00000263966 WRNIP1Q96S55 665 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 PCIF1Q9H4Z3 704 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 ZNF556Q9HAH1 456 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 IPPQ9Y573 584 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 GFAPP14136 432 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 ALS2CLQ60I27 953 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 ZWILCHQ9H900 591 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 TMEM161AQ9NX61 479 aa17.57■□□□□ 0.4
USP13-201ENST00000263966 PNMA6FA0A0J9YX94 578 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 BRAFP15056 766 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 ALDH1A3P47895 512 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 KSR1Q8IVT5 923 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 WDR75Q8IWA0 830 aaKnown RBP17.56■□□□□ 0.4
USP13-201ENST00000263966 KLHDC4Q8TBB5 520 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 COA1Q9GZY4 146 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 MRFAP1L1Q96HT8 127 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 MAP3K13O43283 966 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 ATP1A2P50993 1020 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 RASGRF1Q13972 1273 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 TCP11X2Q5H9J9 407 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 FOXP4Q8IVH2 680 aaPredicted RBP17.56■□□□□ 0.4
USP13-201ENST00000263966 ZNF560Q96MR9 790 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 MRPL4Q9BYD3 311 aaKnown RBP17.56■□□□□ 0.4
USP13-201ENST00000263966 PRR23D1E9PI22 279 aaPredicted RBP17.56■□□□□ 0.4
USP13-201ENST00000263966 HNRNPRO43390 633 aaKnown RBP17.56■□□□□ 0.4
USP13-201ENST00000263966 PRR23D2P0DMB1 279 aaPredicted RBP17.56■□□□□ 0.4
USP13-201ENST00000263966 PSMC1P62191 440 aaKnown RBP17.56■□□□□ 0.4
USP13-201ENST00000263966 NAA35Q5VZE5 725 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 CMTR1Q8N1G2 835 aaKnown RBP17.56■□□□□ 0.4
USP13-201ENST00000263966 DCAF4Q8WV16 495 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 H2AFY2Q9P0M6 372 aaPredicted RBP17.56■□□□□ 0.4
USP13-201ENST00000263966 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.56■□□□□ 0.4
USP13-201ENST00000263966 UBA6A0AVT1 1052 aaPredicted RBP17.56■□□□□ 0.4
USP13-201ENST00000263966 TNPO2O14787 897 aaKnown RBP17.56■□□□□ 0.4
USP13-201ENST00000263966 AKT1P31749 480 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 SPON2Q9BUD6 331 aa17.56■□□□□ 0.4
USP13-201ENST00000263966 NDE1Q9NXR1 346 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms