RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 COL1A1P02452 1464 aaPredicted RBP17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 AGPSO00116 658 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 TNNI1P19237 187 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 LMNB1P20700 586 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 GLE1Q53GS7 698 aaKnown RBP17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 AADACL2Q6P093 401 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 POTEJP0CG39 1038 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 EIF2AK2P19525 551 aaKnown RBP17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 CETN2P41208 172 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 RTKN2Q8IZC4 609 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 C1orf54Q8WWF1 131 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 LARSQ9P2J5 1176 aaKnown RBP17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 TLR2O60603 784 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 MMEP08473 750 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 ATF7P17544 494 aaPredicted RBP17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 PON1P27169 355 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 PEX3P56589 373 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 TRAF1Q13077 416 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 NEK9Q8TD19 979 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 HAS1Q92839 578 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 PLVAPQ9BX97 442 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 PLCB1Q9NQ66 1216 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 PI4KBQ9UBF8 816 aa17.5■□□□□ 0.39
PDZRN3-201ENST00000263666 GMNCA6NCL1 334 aa17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 NDUFB10O96000 172 aa17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 PPP4CP60510 307 aa17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 CCDC17Q96LX7 622 aa17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 ACP6Q9NPH0 428 aa17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 TYW1Q9NV66 732 aaKnown RBP17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 SWAP70Q9UH65 585 aa17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 DBR1Q9UK59 544 aaKnown RBP17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 PLEKHG2Q9H7P9 1386 aa17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 PASD1Q8IV76 773 aa17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 FNBP1Q96RU3 617 aa17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 CD248Q9HCU0 757 aa17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 SCN11AQ9UI33 1791 aa17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 SLC10A5Q5PT55 438 aa17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 RPUSD2Q8IZ73 545 aaKnown RBP17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.49■□□□□ 0.39
PDZRN3-201ENST00000263666 ZNF233A6NK53 670 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 POC1B-GALNT4F8VUJ3 575 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 MEFVO15553 781 aaPredicted RBP17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 AMIGO3Q86WK7 504 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 TRIM59Q8IWR1 403 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 HAUS1Q96CS2 278 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 CCPG1Q9ULG6 757 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 EMSYQ7Z589 1322 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 CLNS1AP54105 237 aaKnown RBP17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 PPP2R2AP63151 447 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 FIGNQ5HY92 759 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 FAM114A2Q9NRY5 505 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 HAUS2Q9NVX0 235 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 SLC16A4O15374 487 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 THAP12O43422 761 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 FAM47EQ6ZV65 393 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 MTMR9Q96QG7 549 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 TTYH3Q9C0H2 523 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 EPN3Q9H201 632 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 NKIRAS1Q9NYS0 192 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 TISP43B9A030 160 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 KRT15P19012 456 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 HNRNPH1P31943 449 aaKnown RBP17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 STX2P32856 288 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 MXI1P50539 228 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 STAT2P52630 851 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 TNFAIP1Q13829 316 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 CCDC197Q8NCU1 140 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 INTS2Q9H0H0 1204 aaKnown RBP17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 THAP2Q9H0W7 228 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 RIOX1Q9H6W3 641 aa17.48■□□□□ 0.39
PDZRN3-201ENST00000263666 A6NNZ2 444 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 CUL1Q13616 776 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 TUBB8Q3ZCM7 444 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 EAPPQ56P03 285 aaPredicted RBP17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 POMGNT1Q8WZA1 660 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 FAM84AQ96KN4 292 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 PSMD1Q99460 953 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 EFCC1Q9HA90 598 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 FBXO28Q9NVF7 368 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 hCG_1984214I3L0E3 225 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 SGO2Q562F6 1265 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 ZNF713Q8N859 430 aaPredicted RBP17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 TPCN2Q8NHX9 752 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 TEKT3Q9BXF9 490 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 AARSP49588 968 aaKnown RBP eCLIP17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 USP11P51784 963 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 PTGISQ16647 500 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 MCTP2Q6DN12 878 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 DNAJC19Q96DA6 116 aa17.47■□□□□ 0.39
PDZRN3-201ENST00000263666 FOSP01100 380 aaPredicted RBP17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 CIAPIN1Q6FI81 312 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 MYCBPAPQ8TBZ2 947 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 CEP83Q9Y592 693 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 DDTLA6NHG4 134 aaPredicted RBP17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 RASGRF2O14827 1237 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 CYP26A1O43174 497 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 ECE1P42892 770 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 NUGGCQ68CJ6 796 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 VSIG1Q86XK7 387 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 SYNCQ9H7C4 482 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms