RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 SPAG1Q07617 926 aa9.02□□□□□ -0.97
LDB3-201ENST00000263066 INAQ16352 499 aa9.02□□□□□ -0.97
LDB3-201ENST00000263066 SPRED3Q2MJR0 410 aa9.02□□□□□ -0.97
LDB3-201ENST00000263066 PHLDB2Q86SQ0 1253 aa9.02□□□□□ -0.97
LDB3-201ENST00000263066 CCDC125Q86Z20 511 aa9.02□□□□□ -0.97
LDB3-201ENST00000263066 SMYD4Q8IYR2 804 aaPredicted RBP9.02□□□□□ -0.97
LDB3-201ENST00000263066 PAF1Q8N7H5 531 aa9.02□□□□□ -0.97
LDB3-201ENST00000263066 CEP63Q96MT8 703 aa9.02□□□□□ -0.97
LDB3-201ENST00000263066 TBC1D7Q9P0N9 293 aa9.02□□□□□ -0.97
LDB3-201ENST00000263066 BTBD7Q9P203 1132 aa9.02□□□□□ -0.97
LDB3-201ENST00000263066 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.02□□□□□ -0.97
LDB3-201ENST00000263066 TRIM33Q9UPN9 1127 aa9.02□□□□□ -0.97
LDB3-201ENST00000263066 TDRKHQ9Y2W6 561 aaKnown RBP9.02□□□□□ -0.97
LDB3-201ENST00000263066 CSADQ9Y600 493 aa9.02□□□□□ -0.97
LDB3-201ENST00000263066 COL16A1Q07092 1604 aaPredicted RBP9.02□□□□□ -0.97
LDB3-201ENST00000263066 ITIH6Q6UXX5 1313 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 MOCS3O95396 460 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 ARID5AQ03989 594 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 MTMR3Q13615 1198 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 ZNF554Q86TJ5 538 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 ENGASEQ8NFI3 743 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 XPO6Q96QU8 1125 aaKnown RBP9.01□□□□□ -0.97
LDB3-201ENST00000263066 GJB4Q9NTQ9 266 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 SLIT2O94813 1529 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 FAM163BP0C2L3 166 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 ADD2P35612 726 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 GNAQP50148 359 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 ITGA7Q13683 1181 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 EEPD1Q7L9B9 569 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 PODNQ7Z5L7 613 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 GDAP1Q8TB36 358 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 LZICQ8WZA0 190 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 PRMT6Q96LA8 375 aaPredicted RBP9.01□□□□□ -0.97
LDB3-201ENST00000263066 TRIM47Q96LD4 638 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 DHRS1Q96LJ7 313 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 CNOT10Q9H9A5 744 aaKnown RBP9.01□□□□□ -0.97
LDB3-201ENST00000263066 ZNRF3Q9ULT6 936 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 TAF6LQ9Y6J9 622 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 MAGEA13PA6NCF6 341 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 GH2P01242 217 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 GHRP10912 638 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 STX2P32856 288 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 MAGEA1P43355 309 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 RABL6Q3YEC7 729 aaPredicted RBP9.01□□□□□ -0.97
LDB3-201ENST00000263066 TYW1BQ6NUM6 668 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 TRAPPC11Q7Z392 1133 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 LRRC34Q8IZ02 419 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 NELFBQ8WX92 580 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 OLFM3Q96PB7 478 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 WRNIP1Q96S55 665 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 LRRC27Q9C0I9 530 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 TXLNGQ9NUQ3 528 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 PDP2Q9P2J9 529 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 SERTAD1Q9UHV2 236 aa9.01□□□□□ -0.97
LDB3-201ENST00000263066 ZSCAN5CA6NGD5 496 aaPredicted RBP9□□□□□ -0.97
LDB3-201ENST00000263066 TRAPPC3O43617 180 aa9□□□□□ -0.97
LDB3-201ENST00000263066 NCK2O43639 380 aa9□□□□□ -0.97
LDB3-201ENST00000263066 CFBP00751 764 aa9□□□□□ -0.97
LDB3-201ENST00000263066 NEK2P51955 445 aa9□□□□□ -0.97
LDB3-201ENST00000263066 COPS2P61201 443 aa9□□□□□ -0.97
LDB3-201ENST00000263066 BTKQ06187 659 aa9□□□□□ -0.97
LDB3-201ENST00000263066 SSRP1Q08945 709 aaKnown RBP9□□□□□ -0.97
LDB3-201ENST00000263066 BIRC3Q13489 604 aa9□□□□□ -0.97
LDB3-201ENST00000263066 ANO7Q6IWH7 933 aa9□□□□□ -0.97
LDB3-201ENST00000263066 CFAP61Q8NHU2 1237 aa9□□□□□ -0.97
LDB3-201ENST00000263066 AENQ8WTP8 325 aaKnown RBP9□□□□□ -0.97
LDB3-201ENST00000263066 OTUD5Q96G74 571 aa9□□□□□ -0.97
LDB3-201ENST00000263066 PRMT1Q99873 361 aaKnown RBP9□□□□□ -0.97
LDB3-201ENST00000263066 MTA3Q9BTC8 594 aa9□□□□□ -0.97
LDB3-201ENST00000263066 RRAGCQ9HB90 399 aa9□□□□□ -0.97
LDB3-201ENST00000263066 BMP2KQ9NSY1 1161 aaPredicted RBP9□□□□□ -0.97
LDB3-201ENST00000263066 PNMA2Q9UL42 364 aa9□□□□□ -0.97
LDB3-201ENST00000263066 KCNJ14Q9UNX9 436 aa9□□□□□ -0.97
LDB3-201ENST00000263066 RBMX2Q9Y388 322 aaKnown RBP9□□□□□ -0.97
LDB3-201ENST00000263066 ARIH1Q9Y4X5 557 aaPredicted RBP9□□□□□ -0.97
LDB3-201ENST00000263066 ZNF233A6NK53 670 aa9□□□□□ -0.97
LDB3-201ENST00000263066 KRT16P08779 473 aa9□□□□□ -0.97
LDB3-201ENST00000263066 YY1P25490 414 aa9□□□□□ -0.97
LDB3-201ENST00000263066 NAPAP54920 295 aa9□□□□□ -0.97
LDB3-201ENST00000263066 KLC3Q6P597 504 aa9□□□□□ -0.97
LDB3-201ENST00000263066 USP17L2Q6R6M4 530 aa9□□□□□ -0.97
LDB3-201ENST00000263066 DHX32Q7L7V1 743 aaKnown RBP9□□□□□ -0.97
LDB3-201ENST00000263066 EXOC8Q8IYI6 725 aa9□□□□□ -0.97
LDB3-201ENST00000263066 ALG1Q9BT22 464 aa9□□□□□ -0.97
LDB3-201ENST00000263066 OSBPL10Q9BXB5 764 aa9□□□□□ -0.97
LDB3-201ENST00000263066 KRT23Q9C075 422 aa9□□□□□ -0.97
LDB3-201ENST00000263066 STMN4Q9H169 189 aaPredicted RBP9□□□□□ -0.97
LDB3-201ENST00000263066 MMRN2Q9H8L6 949 aa9□□□□□ -0.97
LDB3-201ENST00000263066 ABHD10Q9NUJ1 306 aa9□□□□□ -0.97
LDB3-201ENST00000263066 TUBA8Q9NY65 449 aaPredicted RBP9□□□□□ -0.97
LDB3-201ENST00000263066 LRWD1Q9UFC0 647 aa9□□□□□ -0.97
LDB3-201ENST00000263066 NUB1Q9Y5A7 615 aa9□□□□□ -0.97
LDB3-201ENST00000263066 WDR91A4D1P6 747 aa9□□□□□ -0.97
LDB3-201ENST00000263066 DDHD2O94830 711 aa9□□□□□ -0.97
LDB3-201ENST00000263066 CHN1P15882 459 aa9□□□□□ -0.97
LDB3-201ENST00000263066 CCR3P51677 355 aa9□□□□□ -0.97
LDB3-201ENST00000263066 ZCWPW2Q504Y3 356 aa9□□□□□ -0.97
LDB3-201ENST00000263066 HSP90AA5PQ58FG0 334 aa9□□□□□ -0.97
LDB3-201ENST00000263066 DENND2CQ68D51 928 aa9□□□□□ -0.97
LDB3-201ENST00000263066 FAAH2Q6GMR7 532 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms