RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 NLRP4Q96MN2 994 aa20.58■□□□□ 0.89
COPE-201ENST00000262812 FDXACB1Q9BRP7 624 aaPredicted RBP20.58■□□□□ 0.89
COPE-201ENST00000262812 GCOM2Q9BZD3 368 aaPredicted RBP20.58■□□□□ 0.89
COPE-201ENST00000262812 RGS18Q9NS28 235 aa20.58■□□□□ 0.89
COPE-201ENST00000262812 LRFN2Q9ULH4 789 aa20.58■□□□□ 0.89
COPE-201ENST00000262812 CDH23Q9H251 3354 aa20.58■□□□□ 0.88
COPE-201ENST00000262812 MYH9P35579 1960 aaKnown RBP20.57■□□□□ 0.88
COPE-201ENST00000262812 MED24O75448 989 aa20.57■□□□□ 0.88
COPE-201ENST00000262812 LYPLA2O95372 231 aa20.57■□□□□ 0.88
COPE-201ENST00000262812 SPATA31C1P0DKV0 1188 aa20.57■□□□□ 0.88
COPE-201ENST00000262812 CDC42EP1Q00587 391 aa20.57■□□□□ 0.88
COPE-201ENST00000262812 CATSPER3Q86XQ3 398 aa20.57■□□□□ 0.88
COPE-201ENST00000262812 EXOC8Q8IYI6 725 aa20.57■□□□□ 0.88
COPE-201ENST00000262812 SP7Q8TDD2 431 aaPredicted RBP20.57■□□□□ 0.88
COPE-201ENST00000262812 PRPF31Q8WWY3 499 aaKnown RBP20.57■□□□□ 0.88
COPE-201ENST00000262812 GBF1Q92538 1859 aa20.57■□□□□ 0.88
COPE-201ENST00000262812 CCDC43Q96MW1 224 aaKnown RBP20.57■□□□□ 0.88
COPE-201ENST00000262812 DHX33Q9H6R0 707 aaKnown RBP20.57■□□□□ 0.88
COPE-201ENST00000262812 STAG3L1P0CL83 205 aa20.56■□□□□ 0.88
COPE-201ENST00000262812 SRGAP2CP0DJJ0 459 aa20.56■□□□□ 0.88
COPE-201ENST00000262812 GRB10Q13322 594 aa20.56■□□□□ 0.88
COPE-201ENST00000262812 EMC2Q15006 297 aa20.56■□□□□ 0.88
COPE-201ENST00000262812 NPAS4Q8IUM7 802 aa20.56■□□□□ 0.88
COPE-201ENST00000262812 FIBCD1Q8N539 461 aa20.56■□□□□ 0.88
COPE-201ENST00000262812 ERMNQ8TAM6 284 aa20.56■□□□□ 0.88
COPE-201ENST00000262812 GDPD5Q8WTR4 605 aa20.56■□□□□ 0.88
COPE-201ENST00000262812 TUFT1Q9NNX1 390 aa20.56■□□□□ 0.88
COPE-201ENST00000262812 ANKEF1Q9NU02 776 aa20.56■□□□□ 0.88
COPE-201ENST00000262812 PPME1Q9Y570 386 aa20.56■□□□□ 0.88
COPE-201ENST00000262812 PCDHB7Q9Y5E2 793 aa20.56■□□□□ 0.88
COPE-201ENST00000262812 SIP14410 1827 aa20.55■□□□□ 0.88
COPE-201ENST00000262812 PTPRSQ13332 1948 aa20.55■□□□□ 0.88
COPE-201ENST00000262812 DGKIO75912 1065 aa20.55■□□□□ 0.88
COPE-201ENST00000262812 ZSCAN20P17040 1043 aaPredicted RBP20.55■□□□□ 0.88
COPE-201ENST00000262812 SARSP49591 514 aaKnown RBP20.55■□□□□ 0.88
COPE-201ENST00000262812 GATMP50440 423 aa20.55■□□□□ 0.88
COPE-201ENST00000262812 BTG3Q14201 252 aaPredicted RBP20.55■□□□□ 0.88
COPE-201ENST00000262812 PAN2Q504Q3 1202 aaKnown RBP20.55■□□□□ 0.88
COPE-201ENST00000262812 RILPL1Q5EBL4 403 aa20.55■□□□□ 0.88
COPE-201ENST00000262812 SLC24A5Q71RS6 500 aa20.55■□□□□ 0.88
COPE-201ENST00000262812 PSPC1Q8WXF1 523 aaKnown RBP20.55■□□□□ 0.88
COPE-201ENST00000262812 MTRQ99707 1265 aa20.55■□□□□ 0.88
COPE-201ENST00000262812 POLR3CQ9BUI4 534 aaPredicted RBP20.55■□□□□ 0.88
COPE-201ENST00000262812 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.55■□□□□ 0.88
COPE-201ENST00000262812 LRWD1Q9UFC0 647 aa20.55■□□□□ 0.88
COPE-201ENST00000262812 COL4A3BPQ9Y5P4 624 aa20.55■□□□□ 0.88
COPE-201ENST00000262812 VPS37CA5D8V6 355 aaPredicted RBP20.54■□□□□ 0.88
COPE-201ENST00000262812 GTPBP6O43824 516 aaPredicted RBP20.54■□□□□ 0.88
COPE-201ENST00000262812 FXR2P51116 673 aaKnown RBP eCLIP20.54■□□□□ 0.882e-7■■□□□ 12.3
COPE-201ENST00000262812 LAMTOR4Q0VGL1 99 aa20.54■□□□□ 0.88
COPE-201ENST00000262812 DSC3Q14574 896 aa20.54■□□□□ 0.88
COPE-201ENST00000262812 EPC2Q52LR7 807 aa20.54■□□□□ 0.88
COPE-201ENST00000262812 ZNF410Q86VK4 478 aa20.54■□□□□ 0.88
COPE-201ENST00000262812 CRIPAKQ8N1N5 446 aa20.54■□□□□ 0.88
COPE-201ENST00000262812 FBXO22Q8NEZ5 403 aa20.54■□□□□ 0.88
COPE-201ENST00000262812 TCP11Q8WWU5 503 aa20.54■□□□□ 0.88
COPE-201ENST00000262812 ZNF689Q96CS4 500 aaPredicted RBP20.54■□□□□ 0.88
COPE-201ENST00000262812 NACC1Q96RE7 527 aa20.54■□□□□ 0.88
COPE-201ENST00000262812 C1orf112Q9NSG2 853 aa20.54■□□□□ 0.88
COPE-201ENST00000262812 MTCH2Q9Y6C9 303 aa20.54■□□□□ 0.88
COPE-201ENST00000262812 EVPLQ92817 2033 aa20.53■□□□□ 0.88
COPE-201ENST00000262812 C9IYK1 514 aa20.53■□□□□ 0.88
COPE-201ENST00000262812 K7ELQ4 463 aaPredicted RBP20.53■□□□□ 0.88
COPE-201ENST00000262812 XRCC6P12956 609 aaKnown RBP eCLIP20.53■□□□□ 0.88
COPE-201ENST00000262812 CCT6AP40227 531 aaKnown RBP20.53■□□□□ 0.88
COPE-201ENST00000262812 RARRES1P49788 294 aa20.53■□□□□ 0.88
COPE-201ENST00000262812 IL17AQ16552 155 aa20.53■□□□□ 0.88
COPE-201ENST00000262812 POTEGQ6S5H5 508 aa20.53■□□□□ 0.88
COPE-201ENST00000262812 DTHD1Q6ZMT9 781 aa20.53■□□□□ 0.88
COPE-201ENST00000262812 MAEAQ7L5Y9 396 aa20.53■□□□□ 0.88
COPE-201ENST00000262812 FERMT3Q86UX7 667 aa20.53■□□□□ 0.88
COPE-201ENST00000262812 TMEM192Q8IY95 271 aa20.53■□□□□ 0.88
COPE-201ENST00000262812 INO80BQ9C086 356 aaPredicted RBP20.53■□□□□ 0.88
COPE-201ENST00000262812 XPNPEP1Q9NQW7 623 aa20.53■□□□□ 0.88
COPE-201ENST00000262812 MICAL3Q7RTP6 2002 aa20.53■□□□□ 0.88
COPE-201ENST00000262812 ADGRA3Q8IWK6 1321 aa20.53■□□□□ 0.88
COPE-201ENST00000262812 LPXNO60711 386 aa20.52■□□□□ 0.88
COPE-201ENST00000262812 USO1O60763 962 aaKnown RBP20.52■□□□□ 0.88
COPE-201ENST00000262812 RPA1P27694 616 aa20.52■□□□□ 0.88
COPE-201ENST00000262812 FAM189BP81408 668 aa20.52■□□□□ 0.88
COPE-201ENST00000262812 PDIA5Q14554 519 aa20.52■□□□□ 0.88
COPE-201ENST00000262812 ECM1Q16610 540 aa20.52■□□□□ 0.88
COPE-201ENST00000262812 FAM102BQ5T8I3 360 aa20.52■□□□□ 0.88
COPE-201ENST00000262812 CATSPER4Q7RTX7 472 aa20.52■□□□□ 0.88
COPE-201ENST00000262812 RNF169Q8NCN4 708 aa20.52■□□□□ 0.88
COPE-201ENST00000262812 ATP6V0A4Q9HBG4 840 aa20.52■□□□□ 0.88
COPE-201ENST00000262812 EYSQ5T1H1 3165 aa20.52■□□□□ 0.87
COPE-201ENST00000262812 PP2D1A8MPX8 630 aa20.51■□□□□ 0.87
COPE-201ENST00000262812 LAD1O00515 517 aa20.51■□□□□ 0.87
COPE-201ENST00000262812 GAS2O43903 313 aaKnown RBP20.51■□□□□ 0.87
COPE-201ENST00000262812 DGAT1O75907 488 aa20.51■□□□□ 0.87
COPE-201ENST00000262812 SFPQP23246 707 aaKnown RBP eCLIP20.51■□□□□ 0.87
COPE-201ENST00000262812 CDC25AP30304 524 aa20.51■□□□□ 0.87
COPE-201ENST00000262812 CTNNB1P35222 781 aa20.51■□□□□ 0.87
COPE-201ENST00000262812 FAM43BQ6ZT52 329 aaPredicted RBP20.51■□□□□ 0.87
COPE-201ENST00000262812 RNF149Q8NC42 400 aa20.51■□□□□ 0.87
COPE-201ENST00000262812 RAB34Q9BZG1 259 aa20.51■□□□□ 0.87
COPE-201ENST00000262812 RC3H2Q9HBD1 1191 aaKnown RBP20.51■□□□□ 0.87
COPE-201ENST00000262812 IFT122Q9HBG6 1241 aa20.51■□□□□ 0.87
COPE-201ENST00000262812 PRDM6Q9NQX0 595 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms