RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 EPHA7Q15375 998 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 TRIP13Q15645 432 aaPredicted RBP14.05□□□□□ -0.16
SEC23B-201ENST00000262544 CRY2Q49AN0 593 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 EPC2Q52LR7 807 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 OTUD6AQ7L8S5 288 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 LNX1Q8TBB1 728 aaPredicted RBP14.05□□□□□ -0.16
SEC23B-201ENST00000262544 ZNF473Q8WTR7 871 aaKnown RBP14.05□□□□□ -0.16
SEC23B-201ENST00000262544 CAVIN3Q969G5 261 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 TYW1Q9NV66 732 aaKnown RBP14.05□□□□□ -0.16
SEC23B-201ENST00000262544 FAM198AQ9UFP1 575 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 PRR12Q9ULL5 1215 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 CENPFP49454 3210 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 IGKV6D-41A0A0C4DH26 115 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 FOXN3O00409 490 aaPredicted RBP14.05□□□□□ -0.16
SEC23B-201ENST00000262544 POLRMTO00411 1230 aaKnown RBP14.05□□□□□ -0.16
SEC23B-201ENST00000262544 ARP10275 920 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 SNX1Q13596 522 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 RRP1BQ14684 758 aaKnown RBP14.05□□□□□ -0.16
SEC23B-201ENST00000262544 UBAP2Q5T6F2 1119 aaKnown RBP14.05□□□□□ -0.16
SEC23B-201ENST00000262544 CPLX4Q7Z7G2 160 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 NLRP14Q86W24 1093 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 SIAH1Q8IUQ4 282 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 PPM1KQ8N3J5 372 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 SH3GL2Q99962 352 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 PARVGQ9HBI0 331 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 ERVK-5Q9HDB9 667 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 PLCB1Q9NQ66 1216 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 WRAP73Q9P2S5 460 aaPredicted RBP14.05□□□□□ -0.16
SEC23B-201ENST00000262544 USP20Q9Y2K6 914 aa14.05□□□□□ -0.16
SEC23B-201ENST00000262544 LAMB2P55268 1798 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 MYH4Q9Y623 1939 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 PSMC2P35998 433 aaKnown RBP14.04□□□□□ -0.16
SEC23B-201ENST00000262544 SPIRE1Q08AE8 756 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 UAP1Q16222 522 aaPredicted RBP14.04□□□□□ -0.16
SEC23B-201ENST00000262544 IFI16Q16666 785 aaKnown RBP14.04□□□□□ -0.16
SEC23B-201ENST00000262544 LENG9Q96B70 501 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 ZNF577Q9BSK1 485 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 WDR18Q9BV38 432 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 KIFC3Q9BVG8 833 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 DLEC1Q9Y238 1755 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 ARHGEF35A5YM69 484 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 FOXO6A8MYZ6 492 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 RBAK-RBAKDNI3L0D1 243 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 CPP00450 1065 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 MDH1P40925 334 aaKnown RBP14.04□□□□□ -0.16
SEC23B-201ENST00000262544 SEMA3FQ13275 785 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 EDRF1Q3B7T1 1238 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 GLE1Q53GS7 698 aaKnown RBP14.04□□□□□ -0.16
SEC23B-201ENST00000262544 COBLL1Q53SF7 1204 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 ZFYVE27Q5T4F4 411 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 FRMD5Q7Z6J6 570 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 C18orf8Q96DM3 657 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 PRMT6Q96LA8 375 aaPredicted RBP14.04□□□□□ -0.16
SEC23B-201ENST00000262544 RAD17O75943 681 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 SHBGP04278 402 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 CHRM1P11229 460 aaPredicted RBP14.04□□□□□ -0.16
SEC23B-201ENST00000262544 SSR1P43307 286 aaKnown RBP14.04□□□□□ -0.16
SEC23B-201ENST00000262544 ZNF844Q08AG5 666 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 SF3B2Q13435 895 aaKnown RBP14.04□□□□□ -0.16
SEC23B-201ENST00000262544 DAB2IPQ5VWQ8 1189 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 PPP1R18Q6NYC8 613 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 MMS22LQ6ZRQ5 1243 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 SUGP1Q8IWZ8 645 aaKnown RBP14.04□□□□□ -0.16
SEC23B-201ENST00000262544 KRT35Q92764 455 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 EDEM3Q9BZQ6 932 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.04□□□□□ -0.16
SEC23B-201ENST00000262544 GPRC5CQ9NQ84 441 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 TCEAL9Q9UHQ7 104 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 PNMA2Q9UL42 364 aa14.04□□□□□ -0.16
SEC23B-201ENST00000262544 PDXKO00764 312 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 SHOX2O60902 331 aaPredicted RBP14.03□□□□□ -0.16
SEC23B-201ENST00000262544 SLITRK3O94933 977 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 FGFR4P22455 802 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 FMO5P49326 533 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 MYL7Q01449 175 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 ORC2Q13416 577 aaPredicted RBP14.03□□□□□ -0.16
SEC23B-201ENST00000262544 CCDC26Q8TAB7 109 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 WHAMMQ8TF30 809 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 CABS1Q96KC9 395 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 POP1Q99575 1024 aaKnown RBP14.03□□□□□ -0.16
SEC23B-201ENST00000262544 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
SEC23B-201ENST00000262544 PTGISQ16647 500 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 QPCTQ16769 361 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 KIAA1755Q5JYT7 1200 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 SP8Q8IXZ3 490 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 SLC30A5Q8TAD4 765 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 MYCBPAPQ8TBZ2 947 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 ADAM33Q9BZ11 813 aa14.03□□□□□ -0.16
SEC23B-201ENST00000262544 GLIS2Q9BZE0 524 aaPredicted RBP14.03□□□□□ -0.16
SEC23B-201ENST00000262544 CNOT8Q9UFF9 292 aaKnown RBP14.03□□□□□ -0.16
SEC23B-201ENST00000262544 F8VZ95 297 aa14.02□□□□□ -0.16
SEC23B-201ENST00000262544 SOX10P56693 466 aa14.02□□□□□ -0.16
SEC23B-201ENST00000262544 DR1Q01658 176 aa14.02□□□□□ -0.16
SEC23B-201ENST00000262544 MCTP2Q6DN12 878 aa14.02□□□□□ -0.16
SEC23B-201ENST00000262544 NT5DC3Q86UY8 548 aa14.02□□□□□ -0.16
SEC23B-201ENST00000262544 CEP57Q86XR8 500 aa14.02□□□□□ -0.16
SEC23B-201ENST00000262544 SYN2Q92777 582 aaPredicted RBP14.02□□□□□ -0.16
SEC23B-201ENST00000262544 SAAL1Q96ER3 474 aa14.02□□□□□ -0.16
SEC23B-201ENST00000262544 GJD4Q96KN9 370 aaPredicted RBP14.02□□□□□ -0.16
SEC23B-201ENST00000262544 CCDC17Q96LX7 622 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms